Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 SGF11YPL047W 300 nt0.89□□□□□ -2.27
SHE3P38272 SEC3YER008C 4011 nt0.88□□□□□ -2.27
SHE3P38272 OLI1Q0130 231 nt0.87□□□□□ -2.27
SHE3P38272 YPR010C-AYPR010C-A 219 nt0.87□□□□□ -2.27
SHE3P38272 UTP20YBL004W 7482 nt0.86□□□□□ -2.27
SHE3P38272 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
SHE3P38272 SCC2YDR180W 4482 nt0.86□□□□□ -2.27
SHE3P38272 NUP157YER105C 4176 nt0.86□□□□□ -2.27
SHE3P38272 MYO1YHR023W 5787 nt0.85□□□□□ -2.27
SHE3P38272 PAN2YGL094C 3348 nt0.85□□□□□ -2.27
SHE3P38272 YPR117WYPR117W 7470 nt0.84□□□□□ -2.27
SHE3P38272 YDL196WYDL196W 330 nt0.84□□□□□ -2.27
SHE3P38272 tF(GAA)BtF(GAA)B 73 nt0.84□□□□□ -2.27
SHE3P38272 tF(GAA)FtF(GAA)F 73 nt0.84□□□□□ -2.27
SHE3P38272 tF(GAA)GtF(GAA)G 73 nt0.84□□□□□ -2.27
SHE3P38272 tF(GAA)H1tF(GAA)H1 73 nt0.84□□□□□ -2.27
SHE3P38272 tF(GAA)H2tF(GAA)H2 73 nt0.84□□□□□ -2.27
SHE3P38272 tF(GAA)MtF(GAA)M 73 nt0.84□□□□□ -2.27
SHE3P38272 tF(GAA)P1tF(GAA)P1 73 nt0.84□□□□□ -2.27
SHE3P38272 tF(GAA)P2tF(GAA)P2 73 nt0.84□□□□□ -2.27
SHE3P38272 ALG13YGL047W 609 nt0.84□□□□□ -2.27
SHE3P38272 YHL042WYHL042W 453 nt0.84□□□□□ -2.27
SHE3P38272 RPS27BYHR021C 249 nt0.84□□□□□ -2.27
SHE3P38272 RPL39YJL189W 156 nt0.84□□□□□ -2.27
SHE3P38272 YMR031W-AYMR031W-A 327 nt0.84□□□□□ -2.27
SHE3P38272 YOR015WYOR015W 360 nt0.84□□□□□ -2.27
SHE3P38272 YFR012W-AYFR012W-A 87 nt0.83□□□□□ -2.28
SHE3P38272 YNL211CYNL211C 261 nt0.83□□□□□ -2.28
SHE3P38272 CSE2YNR010W 450 nt0.83□□□□□ -2.28
SHE3P38272 KAP120YPL125W 3099 nt0.83□□□□□ -2.28
SHE3P38272 RAD61YDR014W 1944 nt0.83□□□□□ -2.28
SHE3P38272 YGR069WYGR069W 336 nt0.82□□□□□ -2.28
SHE3P38272 YMR321CYMR321C 318 nt0.82□□□□□ -2.28
SHE3P38272 YOR218CYOR218C 420 nt0.82□□□□□ -2.28
SHE3P38272 BFR2YDR299W 1605 nt0.82□□□□□ -2.28
SHE3P38272 YCS4YLR272C 3531 nt0.81□□□□□ -2.28
SHE3P38272 YDR354C-AYDR354C-A 144 nt0.81□□□□□ -2.28
SHE3P38272 PAU12YGR294W 363 nt0.81□□□□□ -2.28
SHE3P38272 CMC4YMR194C-B 222 nt0.81□□□□□ -2.28
SHE3P38272 YMR160WYMR160W 2451 nt0.81□□□□□ -2.28
SHE3P38272 YNL146WYNL146W 303 nt0.8□□□□□ -2.28
SHE3P38272 DOP1YDR141C 5097 nt0.8□□□□□ -2.28
SHE3P38272 YNL028WYNL028W 318 nt0.79□□□□□ -2.28
SHE3P38272 YNL277W-AYNL277W-A 189 nt0.79□□□□□ -2.28
SHE3P38272 IES4YOR189W 351 nt0.79□□□□□ -2.28
SHE3P38272 NOP9YJL010C 2001 nt0.77□□□□□ -2.29
SHE3P38272 YPL044CYPL044C 549 nt0.77□□□□□ -2.29
SHE3P38272 YDL185C-AYDL185C-A 228 nt0.76□□□□□ -2.29
SHE3P38272 QCR9YGR183C 201 nt0.76□□□□□ -2.29
SHE3P38272 YLR120W-AYLR120W-A 102 nt0.76□□□□□ -2.29
SHE3P38272 snR65snR65 100 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)HtT(AGU)H 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)I1tT(AGU)I1 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)I2tT(AGU)I2 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)JtT(AGU)J 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)N1tT(AGU)N1 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)N2tT(AGU)N2 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)O1tT(AGU)O1 73 nt0.75□□□□□ -2.29
SHE3P38272 tT(AGU)O2tT(AGU)O2 73 nt0.75□□□□□ -2.29
SHE3P38272 ASE1YOR058C 2658 nt0.74□□□□□ -2.29
SHE3P38272 snR74snR74 88 nt0.74□□□□□ -2.29
SHE3P38272 ISD11YER048W-A 285 nt0.74□□□□□ -2.29
SHE3P38272 YGL052WYGL052W 306 nt0.74□□□□□ -2.29
SHE3P38272 YLL019W-AYLL019W-A 93 nt0.74□□□□□ -2.29
SHE3P38272 SEC1YDR164C 2175 nt0.73□□□□□ -2.29
SHE3P38272 YEL020C-BYEL020C-B 198 nt0.73□□□□□ -2.29
SHE3P38272 YJL197C-AYJL197C-A 282 nt0.73□□□□□ -2.29
SHE3P38272 YOR231C-AYOR231C-A 201 nt0.73□□□□□ -2.29
SHE3P38272 YPR092WYPR092W 306 nt0.73□□□□□ -2.29
SHE3P38272 YMR172C-AYMR172C-A 384 nt0.72□□□□□ -2.29
SHE3P38272 YDL073WYDL073W 2955 nt0.72□□□□□ -2.29
SHE3P38272 PMP1YCR024C-A 123 nt0.71□□□□□ -2.3
SHE3P38272 PAA1YDR071C 576 nt0.71□□□□□ -2.3
SHE3P38272 YJL026C-AYJL026C-A 222 nt0.71□□□□□ -2.3
SHE3P38272 YOR282WYOR282W 321 nt0.71□□□□□ -2.3
SHE3P38272 YAL067W-AYAL067W-A 228 nt0.7□□□□□ -2.3
SHE3P38272 YCR018C-AYCR018C-A 255 nt0.69□□□□□ -2.3
SHE3P38272 YOR008C-AYOR008C-A 225 nt0.69□□□□□ -2.3
SHE3P38272 RPL26BYGR034W 384 nt0.68□□□□□ -2.3
SHE3P38272 COY1YKL179C 2040 nt0.68□□□□□ -2.3
SHE3P38272 NPR2YEL062W 1848 nt0.68□□□□□ -2.3
SHE3P38272 YOL014WYOL014W 375 nt0.67□□□□□ -2.3
SHE3P38272 YOR072W-BYOR072W-B 162 nt0.67□□□□□ -2.3
SHE3P38272 YKL145W-AYKL145W-A 93 nt0.66□□□□□ -2.3
SHE3P38272 YOR161W-AYOR161W-A 81 nt0.66□□□□□ -2.3
SHE3P38272 YPL152W-AYPL152W-A 99 nt0.66□□□□□ -2.3
SHE3P38272 snR190snR190 190 nt0.66□□□□□ -2.3
SHE3P38272 CHS6YJL099W 2241 nt0.65□□□□□ -2.3
SHE3P38272 YER181CYER181C 324 nt0.65□□□□□ -2.31
SHE3P38272 YGL041CYGL041C 204 nt0.65□□□□□ -2.31
SHE3P38272 YML002WYML002W 2214 nt0.64□□□□□ -2.31
SHE3P38272 YHR063W-AYHR063W-A 336 nt0.64□□□□□ -2.31
SHE3P38272 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
SHE3P38272 YPR159C-AYPR159C-A 102 nt0.63□□□□□ -2.31
SHE3P38272 YLR282CYLR282C 342 nt0.62□□□□□ -2.31
SHE3P38272 tN(GUU)QtN(GUU)Q 71 nt0.61□□□□□ -2.31
SHE3P38272 YMR307C-AYMR307C-A 195 nt0.61□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 20.9 ms