Protein–RNA interactions for Protein: P38181

NUP170, Nucleoporin NUP170, yeastyeast

Predictions only

Length 1,502 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP170P38181 SPC24YMR117C 642 nt-2.52□□□□□ -2.81
NUP170P38181 YCR018C-AYCR018C-A 255 nt-2.54□□□□□ -2.82
NUP170P38181 YBL039C-AYBL039C-A 84 nt-2.54□□□□□ -2.82
NUP170P38181 YPR092WYPR092W 306 nt-2.56□□□□□ -2.82
NUP170P38181 YJL086CYJL086C 369 nt-2.58□□□□□ -2.82
NUP170P38181 YDR290WYDR290W 330 nt-2.58□□□□□ -2.82
NUP170P38181 BER1YLR412W 825 nt-2.6□□□□□ -2.83
NUP170P38181 YBR072C-AYBR072C-A 162 nt-2.6□□□□□ -2.83
NUP170P38181 snR5snR5 204 nt-2.61□□□□□ -2.83
NUP170P38181 YPL068CYPL068C 882 nt-2.61□□□□□ -2.83
NUP170P38181 snR189snR189 189 nt-2.61□□□□□ -2.83
NUP170P38181 tT(UGU)Q1tT(UGU)Q1 76 nt-2.62□□□□□ -2.83
NUP170P38181 COX7YMR256C 183 nt-2.62□□□□□ -2.83
NUP170P38181 YOR366WYOR366W 354 nt-2.62□□□□□ -2.83
NUP170P38181 YDR543CYDR543C 300 nt-2.63□□□□□ -2.83
NUP170P38181 PMP2YEL017C-A 132 nt-2.63□□□□□ -2.83
NUP170P38181 YAL068W-AYAL068W-A 255 nt-2.63□□□□□ -2.83
NUP170P38181 YOR170WYOR170W 306 nt-2.63□□□□□ -2.83
NUP170P38181 RUF20RUF20 443 nt-2.64□□□□□ -2.83
NUP170P38181 snR24snR24 89 nt-2.65□□□□□ -2.83
NUP170P38181 PET20YPL159C 762 nt-2.66□□□□□ -2.84
NUP170P38181 YJR140W-AYJR140W-A 150 nt-2.67□□□□□ -2.84
NUP170P38181 CUP1-1YHR053C 186 nt-2.68□□□□□ -2.84
NUP170P38181 CUP1-2YHR055C 186 nt-2.68□□□□□ -2.84
NUP170P38181 YLR264C-AYLR264C-A 117 nt-2.68□□□□□ -2.84
NUP170P38181 YNL162W-AYNL162W-A 219 nt-2.68□□□□□ -2.84
NUP170P38181 SCEIQ0160 708 nt-2.73□□□□□ -2.85
NUP170P38181 BNS1YGR230W 414 nt-2.74□□□□□ -2.85
NUP170P38181 YOR192C-CYOR192C-C 237 nt-2.74□□□□□ -2.85
NUP170P38181 YER135CYER135C 393 nt-2.76□□□□□ -2.85
NUP170P38181 IRC16YPR038W 360 nt-2.77□□□□□ -2.85
NUP170P38181 snR72snR72 98 nt-2.78□□□□□ -2.85
NUP170P38181 YOR011W-AYOR011W-A 207 nt-2.78□□□□□ -2.85
NUP170P38181 YPR016W-AYPR016W-A 261 nt-2.78□□□□□ -2.86
NUP170P38181 RPL22BYFL034C-A 369 nt-2.79□□□□□ -2.86
NUP170P38181 YBL107W-AYBL107W-A 105 nt-2.79□□□□□ -2.86
NUP170P38181 SGF11YPL047W 300 nt-2.79□□□□□ -2.86
NUP170P38181 THG1YGR024C 714 nt-2.81□□□□□ -2.86
NUP170P38181 DFG10YIL049W 762 nt-2.83□□□□□ -2.86
NUP170P38181 snR74snR74 88 nt-2.83□□□□□ -2.86
NUP170P38181 YGL015CYGL015C 393 nt-2.83□□□□□ -2.86
NUP170P38181 SRB7YDR308C 423 nt-2.84□□□□□ -2.86
NUP170P38181 CWC23YGL128C 852 nt-2.84□□□□□ -2.86
NUP170P38181 Q0142Q0142 177 nt-2.84□□□□□ -2.86
NUP170P38181 MND1YGL183C 660 nt-2.85□□□□□ -2.87
NUP170P38181 YPR010C-AYPR010C-A 219 nt-2.85□□□□□ -2.87
NUP170P38181 HUR1YGL168W 333 nt-2.86□□□□□ -2.87
NUP170P38181 YKL202WYKL202W 582 nt-2.87□□□□□ -2.87
NUP170P38181 VPS20YMR077C 666 nt-2.87□□□□□ -2.87
NUP170P38181 YDR366CYDR366C 399 nt-2.88□□□□□ -2.87
NUP170P38181 VPS63YLR261C 327 nt-2.88□□□□□ -2.87
NUP170P38181 CBS1YDL069C 690 nt-2.88□□□□□ -2.87
NUP170P38181 RDS3YPR094W 324 nt-2.92□□□□□ -2.88
NUP170P38181 YGL052WYGL052W 306 nt-2.93□□□□□ -2.88
NUP170P38181 YOL106WYOL106W 354 nt-2.94□□□□□ -2.88
NUP170P38181 LSM4YER112W 564 nt-2.96□□□□□ -2.88
NUP170P38181 CDC65tQ(CUG)M 72 nt-2.96□□□□□ -2.88
NUP170P38181 POP7YBR167C 423 nt-2.97□□□□□ -2.88
NUP170P38181 YER053C-AYER053C-A 114 nt-2.98□□□□□ -2.89
NUP170P38181 YNL058CYNL058C 951 nt-2.98□□□□□ -2.89
NUP170P38181 snR51snR51 107 nt-2.98□□□□□ -2.89
NUP170P38181 SDH6YDR379C-A 240 nt-2.99□□□□□ -2.89
NUP170P38181 snR59snR59 78 nt-3□□□□□ -2.89
NUP170P38181 YER188C-AYER188C-A 300 nt-3□□□□□ -2.89
NUP170P38181 YGL239CYGL239C 315 nt-3.01□□□□□ -2.89
NUP170P38181 YPT6YLR262C 648 nt-3.03□□□□□ -2.89
NUP170P38181 AIM29YKR074W 468 nt-3.03□□□□□ -2.9
NUP170P38181 snR81snR81 201 nt-3.04□□□□□ -2.9
NUP170P38181 JLP2YMR132C 627 nt-3.04□□□□□ -2.9
NUP170P38181 ZEO1YOL109W 342 nt-3.04□□□□□ -2.9
NUP170P38181 YHR125WYHR125W 306 nt-3.05□□□□□ -2.9
NUP170P38181 ACF4YJR083C 930 nt-3.05□□□□□ -2.9
NUP170P38181 FYV7YLR068W 456 nt-3.09□□□□□ -2.9
NUP170P38181 YPL229WYPL229W 621 nt-3.09□□□□□ -2.9
NUP170P38181 HMLALPHA2YCL067C 633 nt-3.1□□□□□ -2.91
NUP170P38181 MATALPHA2YCR039C 633 nt-3.1□□□□□ -2.91
NUP170P38181 HMRA2YCR096C 360 nt-3.1□□□□□ -2.91
NUP170P38181 YOR364WYOR364W 369 nt-3.11□□□□□ -2.91
NUP170P38181 YGR025WYGR025W 303 nt-3.13□□□□□ -2.91
NUP170P38181 YMR304C-AYMR304C-A 351 nt-3.13□□□□□ -2.91
NUP170P38181 EAF6YJR082C 342 nt-3.14□□□□□ -2.91
NUP170P38181 YFR009W-AYFR009W-A 258 nt-3.17□□□□□ -2.92
NUP170P38181 snR77snR77 88 nt-3.19□□□□□ -2.92
NUP170P38181 YOR121CYOR121C 306 nt-3.19□□□□□ -2.92
NUP170P38181 YGR240C-AYGR240C-A 201 nt-3.2□□□□□ -2.92
NUP170P38181 YJR087WYJR087W 351 nt-3.21□□□□□ -2.92
NUP170P38181 YKL100W-AYKL100W-A 90 nt-3.22□□□□□ -2.92
NUP170P38181 CSE2YNR010W 450 nt-3.22□□□□□ -2.92
NUP170P38181 ILM1YJR118C 612 nt-3.24□□□□□ -2.93
NUP170P38181 YKL063CYKL063C 504 nt-3.24□□□□□ -2.93
NUP170P38181 YBR285WYBR285W 435 nt-3.24□□□□□ -2.93
NUP170P38181 YOR293C-AYOR293C-A 150 nt-3.24□□□□□ -2.93
NUP170P38181 YAR029WYAR029W 225 nt-3.25□□□□□ -2.93
NUP170P38181 YDR354C-AYDR354C-A 144 nt-3.26□□□□□ -2.93
NUP170P38181 snR39BsnR39B 96 nt-3.27□□□□□ -2.93
NUP170P38181 YCR001WYCR001W 315 nt-3.28□□□□□ -2.93
NUP170P38181 YGL230CYGL230C 444 nt-3.28□□□□□ -2.93
NUP170P38181 YLR334CYLR334C 381 nt-3.29□□□□□ -2.94
NUP170P38181 YNL205CYNL205C 423 nt-3.31□□□□□ -2.94
NUP170P38181 YLR456WYLR456W 615 nt-3.32□□□□□ -2.94
Retrieved 100 of 7,029 protein–RNA pairs in 66.1 ms