Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM23P36406 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM23P36406 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM23P36406 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM23P36406 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM23P36406 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM23P36406 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM23P36406 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM23P36406 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM23P36406 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM23P36406 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM23P36406 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
TRIM23P36406 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM23P36406 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 AC239809.2-201ENST00000415381 517 ntBASIC19.75■□□□□ 0.75
TRIM23P36406 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM23P36406 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM23P36406 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 AC008550.1-201ENST00000511500 884 ntBASIC19.75■□□□□ 0.75
TRIM23P36406 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM23P36406 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM23P36406 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM23P36406 AC110285.5-201ENST00000611501 352 ntBASIC19.75■□□□□ 0.75
TRIM23P36406 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM23P36406 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM23P36406 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM23P36406 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM23P36406 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM23P36406 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM23P36406 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM23P36406 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM23P36406 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM23P36406 RPS2P4-201ENST00000476944 856 ntBASIC19.74■□□□□ 0.75
TRIM23P36406 PRKY-204ENST00000533551 1019 ntBASIC19.74■□□□□ 0.75
TRIM23P36406 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM23P36406 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TRIM23P36406 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM23P36406 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM23P36406 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM23P36406 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM23P36406 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM23P36406 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM23P36406 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM23P36406 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM23P36406 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM23P36406 AL121906.2-201ENST00000621597 723 ntBASIC19.73■□□□□ 0.75
TRIM23P36406 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM23P36406 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM23P36406 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.73■□□□□ 0.75
TRIM23P36406 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM23P36406 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TRIM23P36406 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM23P36406 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM23P36406 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM23P36406 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM23P36406 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM23P36406 KRASP1-201ENST00000407852 552 ntBASIC19.72■□□□□ 0.75
TRIM23P36406 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM23P36406 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM23P36406 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM23P36406 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM23P36406 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM23P36406 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM23P36406 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM23P36406 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM23P36406 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM23P36406 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRIM23P36406 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM23P36406 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms