Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHKAP35790 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.13■□□□□ 0.97
CHKAP35790 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.13■□□□□ 0.97
CHKAP35790 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.13■□□□□ 0.97
CHKAP35790 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.13■□□□□ 0.97
CHKAP35790 HLA-B-256ENST00000639848 1089 ntBASIC21.13■□□□□ 0.97
CHKAP35790 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.13■□□□□ 0.97
CHKAP35790 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CHKAP35790 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHKAP35790 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHKAP35790 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHKAP35790 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.12■□□□□ 0.97
CHKAP35790 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.12■□□□□ 0.97
CHKAP35790 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CHKAP35790 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.12■□□□□ 0.97
CHKAP35790 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.12■□□□□ 0.97
CHKAP35790 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHKAP35790 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.12■□□□□ 0.97
CHKAP35790 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.12■□□□□ 0.97
CHKAP35790 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.12■□□□□ 0.97
CHKAP35790 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHKAP35790 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CHKAP35790 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.12■□□□□ 0.97
CHKAP35790 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CHKAP35790 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHKAP35790 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.11■□□□□ 0.97
CHKAP35790 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.11■□□□□ 0.97
CHKAP35790 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CHKAP35790 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.11■□□□□ 0.97
CHKAP35790 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CHKAP35790 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 AC060766.5-201ENST00000590539 871 ntBASIC21.11■□□□□ 0.97
CHKAP35790 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CHKAP35790 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.11■□□□□ 0.97
CHKAP35790 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.11■□□□□ 0.97
CHKAP35790 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHKAP35790 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHKAP35790 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.1■□□□□ 0.97
CHKAP35790 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CHKAP35790 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.1■□□□□ 0.97
CHKAP35790 UNC93B5-201ENST00000530315 699 ntBASIC21.1■□□□□ 0.97
CHKAP35790 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.1■□□□□ 0.97
CHKAP35790 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.1■□□□□ 0.97
CHKAP35790 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.1■□□□□ 0.97
CHKAP35790 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CHKAP35790 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
CHKAP35790 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.1■□□□□ 0.97
CHKAP35790 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHKAP35790 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.09■□□□□ 0.97
CHKAP35790 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.09■□□□□ 0.97
CHKAP35790 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
CHKAP35790 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHKAP35790 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.09■□□□□ 0.97
CHKAP35790 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHKAP35790 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHKAP35790 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.09■□□□□ 0.97
CHKAP35790 ESRRAP1-201ENST00000400596 1257 ntBASIC21.09■□□□□ 0.97
CHKAP35790 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
CHKAP35790 ITM2C-210ENST00000620962 501 ntBASIC21.09■□□□□ 0.97
CHKAP35790 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHKAP35790 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.09■□□□□ 0.97
CHKAP35790 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHKAP35790 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms