Protein–RNA interactions for Protein: P35178

RRP1, Ribosomal RNA-processing protein 1, yeastyeast

Predicted RBP Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP1P35178 YBR200W-AYBR200W-A 165 nt1.06□□□□□ -2.24
RRP1P35178 YOR011W-AYOR011W-A 207 nt1.05□□□□□ -2.24
RRP1P35178 WAR1YML076C 2835 nt1.05□□□□□ -2.24
RRP1P35178 ALG13YGL047W 609 nt1.04□□□□□ -2.24
RRP1P35178 RAD61YDR014W 1944 nt1.03□□□□□ -2.25
RRP1P35178 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
RRP1P35178 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
RRP1P35178 RPS27BYHR021C 249 nt1.02□□□□□ -2.25
RRP1P35178 YMR321CYMR321C 318 nt1.02□□□□□ -2.25
RRP1P35178 YNL277W-AYNL277W-A 189 nt1.02□□□□□ -2.25
RRP1P35178 CSE2YNR010W 450 nt1.02□□□□□ -2.25
RRP1P35178 YOR015WYOR015W 360 nt1.02□□□□□ -2.25
RRP1P35178 snR65snR65 100 nt1.01□□□□□ -2.25
RRP1P35178 YGR069WYGR069W 336 nt1.01□□□□□ -2.25
RRP1P35178 MCM10YIL150C 1716 nt1.01□□□□□ -2.25
RRP1P35178 OLI1Q0130 231 nt1□□□□□ -2.25
RRP1P35178 YOR231C-AYOR231C-A 201 nt1□□□□□ -2.25
RRP1P35178 SGF11YPL047W 300 nt1□□□□□ -2.25
RRP1P35178 SMC1YFL008W 3678 nt1□□□□□ -2.25
RRP1P35178 YDL196WYDL196W 330 nt0.99□□□□□ -2.25
RRP1P35178 YNL028WYNL028W 318 nt0.99□□□□□ -2.25
RRP1P35178 YOR218CYOR218C 420 nt0.99□□□□□ -2.25
RRP1P35178 BUD3YCL014W 4911 nt0.99□□□□□ -2.25
RRP1P35178 IES4YOR189W 351 nt0.97□□□□□ -2.25
RRP1P35178 YEL020C-BYEL020C-B 198 nt0.96□□□□□ -2.26
RRP1P35178 YLR120W-AYLR120W-A 102 nt0.96□□□□□ -2.26
RRP1P35178 PAU24YBR301W 363 nt0.96□□□□□ -2.26
RRP1P35178 YNL211CYNL211C 261 nt0.95□□□□□ -2.26
RRP1P35178 YDR354C-AYDR354C-A 144 nt0.94□□□□□ -2.26
RRP1P35178 YFR012W-AYFR012W-A 87 nt0.93□□□□□ -2.26
RRP1P35178 YMR172C-AYMR172C-A 384 nt0.93□□□□□ -2.26
RRP1P35178 YJL197C-AYJL197C-A 282 nt0.92□□□□□ -2.26
RRP1P35178 CMC4YMR194C-B 222 nt0.92□□□□□ -2.26
RRP1P35178 ASE1YOR058C 2658 nt0.92□□□□□ -2.26
RRP1P35178 RKR1YMR247C 4689 nt0.91□□□□□ -2.26
RRP1P35178 YER181CYER181C 324 nt0.91□□□□□ -2.26
RRP1P35178 YGL052WYGL052W 306 nt0.91□□□□□ -2.26
RRP1P35178 YOR008C-AYOR008C-A 225 nt0.91□□□□□ -2.26
RRP1P35178 NOP9YJL010C 2001 nt0.91□□□□□ -2.26
RRP1P35178 BFR2YDR299W 1605 nt0.9□□□□□ -2.26
RRP1P35178 snR74snR74 88 nt0.9□□□□□ -2.27
RRP1P35178 YPR092WYPR092W 306 nt0.9□□□□□ -2.27
RRP1P35178 YLL019W-AYLL019W-A 93 nt0.89□□□□□ -2.27
RRP1P35178 YPL044CYPL044C 549 nt0.89□□□□□ -2.27
RRP1P35178 YPL152W-AYPL152W-A 99 nt0.89□□□□□ -2.27
RRP1P35178 YDL185C-AYDL185C-A 228 nt0.87□□□□□ -2.27
RRP1P35178 ISD11YER048W-A 285 nt0.87□□□□□ -2.27
RRP1P35178 YJL026C-AYJL026C-A 222 nt0.87□□□□□ -2.27
RRP1P35178 PMP1YCR024C-A 123 nt0.85□□□□□ -2.27
RRP1P35178 YML099W-AYML099W-A 330 nt0.85□□□□□ -2.27
RRP1P35178 PAA1YDR071C 576 nt0.84□□□□□ -2.27
RRP1P35178 YAL067W-AYAL067W-A 228 nt0.84□□□□□ -2.27
RRP1P35178 YOR282WYOR282W 321 nt0.83□□□□□ -2.28
RRP1P35178 YGL041CYGL041C 204 nt0.82□□□□□ -2.28
RRP1P35178 YOR072W-BYOR072W-B 162 nt0.82□□□□□ -2.28
RRP1P35178 snR49snR49 165 nt0.82□□□□□ -2.28
RRP1P35178 PAM16YJL104W 450 nt0.81□□□□□ -2.28
RRP1P35178 RPL26BYGR034W 384 nt0.8□□□□□ -2.28
RRP1P35178 YMR307C-AYMR307C-A 195 nt0.8□□□□□ -2.28
RRP1P35178 YCR018C-AYCR018C-A 255 nt0.79□□□□□ -2.28
RRP1P35178 YCR022CYCR022C 345 nt0.79□□□□□ -2.28
RRP1P35178 tF(GAA)QtF(GAA)Q 75 nt0.79□□□□□ -2.28
RRP1P35178 STF2YGR008C 255 nt0.79□□□□□ -2.28
RRP1P35178 COY1YKL179C 2040 nt0.78□□□□□ -2.28
RRP1P35178 SEC1YDR164C 2175 nt0.77□□□□□ -2.29
RRP1P35178 YHR063W-AYHR063W-A 336 nt0.77□□□□□ -2.29
RRP1P35178 snR190snR190 190 nt0.77□□□□□ -2.29
RRP1P35178 LTE1YAL024C 4308 nt0.77□□□□□ -2.29
RRP1P35178 MYO1YHR023W 5787 nt0.77□□□□□ -2.29
RRP1P35178 NPR2YEL062W 1848 nt0.76□□□□□ -2.29
RRP1P35178 snR55snR55 98 nt0.76□□□□□ -2.29
RRP1P35178 YIR030W-AYIR030W-A 384 nt0.76□□□□□ -2.29
RRP1P35178 YOR161W-AYOR161W-A 81 nt0.76□□□□□ -2.29
RRP1P35178 CHS6YJL099W 2241 nt0.75□□□□□ -2.29
RRP1P35178 YIL142C-AYIL142C-A 333 nt0.75□□□□□ -2.29
RRP1P35178 HUG1YML058W-A 207 nt0.75□□□□□ -2.29
RRP1P35178 RPS30BYOR182C 192 nt0.75□□□□□ -2.29
RRP1P35178 snR80snR80 171 nt0.74□□□□□ -2.29
RRP1P35178 YGL188C-AYGL188C-A 141 nt0.74□□□□□ -2.29
RRP1P35178 YIL134C-AYIL134C-A 204 nt0.74□□□□□ -2.29
RRP1P35178 YLR282CYLR282C 342 nt0.74□□□□□ -2.29
RRP1P35178 ABF2YMR072W 552 nt0.74□□□□□ -2.29
RRP1P35178 YOL155W-AYOL155W-A 135 nt0.74□□□□□ -2.29
RRP1P35178 YBR182C-AYBR182C-A 195 nt0.74□□□□□ -2.29
RRP1P35178 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
RRP1P35178 YOR345CYOR345C 351 nt0.73□□□□□ -2.29
RRP1P35178 YSP1YHR155W 3687 nt0.73□□□□□ -2.29
RRP1P35178 YGL123C-AYGL123C-A 231 nt0.72□□□□□ -2.29
RRP1P35178 YPR160W-AYPR160W-A 81 nt0.72□□□□□ -2.29
RRP1P35178 YKU70YMR284W 1809 nt0.71□□□□□ -2.3
RRP1P35178 UBP3YER151C 2739 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)BtT(AGU)B 73 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)CtT(AGU)C 73 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)DtT(AGU)D 73 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)HtT(AGU)H 73 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)I1tT(AGU)I1 73 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)I2tT(AGU)I2 73 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)JtT(AGU)J 73 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)N1tT(AGU)N1 73 nt0.71□□□□□ -2.3
RRP1P35178 tT(AGU)N2tT(AGU)N2 73 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms