Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC6A4P31645 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
SLC6A4P31645 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A4P31645 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A4P31645 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC6A4P31645 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SLC6A4P31645 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A4P31645 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A4P31645 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A4P31645 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC6A4P31645 AL023875.1-201ENST00000640777 796 ntBASIC20.59■□□□□ 0.89
SLC6A4P31645 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC6A4P31645 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SLC6A4P31645 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A4P31645 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SLC6A4P31645 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A4P31645 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC6A4P31645 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC6A4P31645 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SLC6A4P31645 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC6A4P31645 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SLC6A4P31645 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC6A4P31645 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.58■□□□□ 0.89
SLC6A4P31645 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.58■□□□□ 0.89
SLC6A4P31645 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A4P31645 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC6A4P31645 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A4P31645 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
SLC6A4P31645 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SLC6A4P31645 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SLC6A4P31645 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.57■□□□□ 0.88
SLC6A4P31645 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC6A4P31645 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC6A4P31645 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
SLC6A4P31645 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.57■□□□□ 0.88
SLC6A4P31645 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC6A4P31645 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC6A4P31645 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC6A4P31645 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC6A4P31645 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC6A4P31645 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
SLC6A4P31645 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A4P31645 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SLC6A4P31645 AC092667.1-201ENST00000434301 2586 ntBASIC20.56■□□□□ 0.88
SLC6A4P31645 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC6A4P31645 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SLC6A4P31645 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.56■□□□□ 0.88
SLC6A4P31645 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC6A4P31645 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.56■□□□□ 0.88
SLC6A4P31645 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
SLC6A4P31645 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC6A4P31645 AC124016.1-201ENST00000609552 612 ntBASIC20.56■□□□□ 0.88
SLC6A4P31645 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 AL512408.1-201ENST00000569378 2000 ntBASIC20.56■□□□□ 0.88
SLC6A4P31645 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A4P31645 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC6A4P31645 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms