Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.76■□□□□ 0.43
HOXC12P31275 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HOXC12P31275 AC005229.4-201ENST00000610085 2198 ntBASIC17.76■□□□□ 0.43
HOXC12P31275 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC12P31275 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC12P31275 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC12P31275 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.76■□□□□ 0.43
HOXC12P31275 MIR1224-201ENST00000408193 85 ntBASIC17.76■□□□□ 0.43
HOXC12P31275 ECEL1P3-201ENST00000427961 737 ntBASIC17.76■□□□□ 0.43
HOXC12P31275 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.76■□□□□ 0.43
HOXC12P31275 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC12P31275 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.76■□□□□ 0.43
HOXC12P31275 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXC12P31275 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC12P31275 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXC12P31275 FP700111.2-201ENST00000619190 1892 ntBASIC17.75■□□□□ 0.43
HOXC12P31275 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC12P31275 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC12P31275 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC12P31275 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 FAM210CP-201ENST00000445714 574 ntBASIC17.75■□□□□ 0.43
HOXC12P31275 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXC12P31275 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HOXC12P31275 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.75■□□□□ 0.43
HOXC12P31275 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.75■□□□□ 0.43
HOXC12P31275 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXC12P31275 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HOXC12P31275 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HOXC12P31275 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC12P31275 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXC12P31275 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HOXC12P31275 KRT8P36-201ENST00000489121 1440 ntBASIC17.74■□□□□ 0.43
HOXC12P31275 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC12P31275 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC12P31275 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC12P31275 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC12P31275 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HOXC12P31275 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.74■□□□□ 0.43
HOXC12P31275 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC12P31275 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC12P31275 AC008403.3-201ENST00000598924 454 ntBASIC17.74■□□□□ 0.43
HOXC12P31275 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC12P31275 HLA-B-256ENST00000639848 1089 ntBASIC17.74■□□□□ 0.43
HOXC12P31275 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC12P31275 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC12P31275 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC12P31275 AC092368.3-202ENST00000574180 1591 ntBASIC17.74■□□□□ 0.43
HOXC12P31275 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HOXC12P31275 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC12P31275 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HOXC12P31275 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC12P31275 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HOXC12P31275 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
HOXC12P31275 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HOXC12P31275 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC12P31275 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC12P31275 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 AL390719.1-204ENST00000412397 1219 ntBASIC17.73■□□□□ 0.43
HOXC12P31275 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.73■□□□□ 0.43
HOXC12P31275 AC060766.5-201ENST00000590539 871 ntBASIC17.73■□□□□ 0.43
HOXC12P31275 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC12P31275 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC12P31275 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.73■□□□□ 0.43
HOXC12P31275 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HOXC12P31275 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HOXC12P31275 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HOXC12P31275 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC12P31275 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC12P31275 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC12P31275 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC12P31275 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC12P31275 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC12P31275 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms