Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.64■□□□□ 0.73
VARSP26640 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.64■□□□□ 0.73
VARSP26640 CYP21A1P-202ENST00000354927 1481 ntBASIC19.64■□□□□ 0.73
VARSP26640 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VARSP26640 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.64■□□□□ 0.73
VARSP26640 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
VARSP26640 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.64■□□□□ 0.73
VARSP26640 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.64■□□□□ 0.73
VARSP26640 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
VARSP26640 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VARSP26640 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.63■□□□□ 0.73
VARSP26640 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.63■□□□□ 0.73
VARSP26640 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VARSP26640 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.63■□□□□ 0.73
VARSP26640 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VARSP26640 AC092720.2-201ENST00000602388 1665 ntBASIC19.63■□□□□ 0.73
VARSP26640 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.63■□□□□ 0.73
VARSP26640 AC069152.1-201ENST00000438030 544 ntBASIC19.63■□□□□ 0.73
VARSP26640 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.63■□□□□ 0.73
VARSP26640 AF201337.1-201ENST00000520239 748 ntBASIC19.63■□□□□ 0.73
VARSP26640 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.63■□□□□ 0.73
VARSP26640 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.63■□□□□ 0.73
VARSP26640 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.63■□□□□ 0.73
VARSP26640 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.63■□□□□ 0.73
VARSP26640 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.63■□□□□ 0.73
VARSP26640 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.63■□□□□ 0.73
VARSP26640 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.63■□□□□ 0.73
VARSP26640 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARSP26640 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.62■□□□□ 0.73
VARSP26640 KRT8P36-201ENST00000489121 1440 ntBASIC19.62■□□□□ 0.73
VARSP26640 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 AL138781.1-201ENST00000566567 1274 ntBASIC19.62■□□□□ 0.73
VARSP26640 AC133552.2-202ENST00000575694 574 ntBASIC19.62■□□□□ 0.73
VARSP26640 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.62■□□□□ 0.73
VARSP26640 AL050303.2-201ENST00000619798 666 ntBASIC19.62■□□□□ 0.73
VARSP26640 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VARSP26640 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARSP26640 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VARSP26640 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VARSP26640 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.61■□□□□ 0.73
VARSP26640 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.61■□□□□ 0.73
VARSP26640 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.61■□□□□ 0.73
VARSP26640 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
VARSP26640 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 AC112907.3-201ENST00000577781 2400 ntBASIC19.61■□□□□ 0.73
VARSP26640 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 AC099778.1-201ENST00000568593 1911 ntBASIC19.61■□□□□ 0.73
VARSP26640 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VARSP26640 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VARSP26640 AC087633.2-202ENST00000565166 1439 ntBASIC19.6■□□□□ 0.73
VARSP26640 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.6■□□□□ 0.73
VARSP26640 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.6■□□□□ 0.73
VARSP26640 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VARSP26640 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms