Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LAMA1P25391 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.73■□□□□ 0.75
LAMA1P25391 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.73■□□□□ 0.75
LAMA1P25391 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LAMA1P25391 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LAMA1P25391 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LAMA1P25391 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LAMA1P25391 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LAMA1P25391 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LAMA1P25391 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.73■□□□□ 0.75
LAMA1P25391 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LAMA1P25391 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LAMA1P25391 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LAMA1P25391 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.72■□□□□ 0.75
LAMA1P25391 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LAMA1P25391 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LAMA1P25391 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.72■□□□□ 0.75
LAMA1P25391 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LAMA1P25391 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.72■□□□□ 0.75
LAMA1P25391 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LAMA1P25391 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LAMA1P25391 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LAMA1P25391 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LAMA1P25391 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.72■□□□□ 0.75
LAMA1P25391 AL358472.4-201ENST00000633140 710 ntBASIC19.72■□□□□ 0.75
LAMA1P25391 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LAMA1P25391 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
LAMA1P25391 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.72■□□□□ 0.75
LAMA1P25391 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
LAMA1P25391 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.71■□□□□ 0.75
LAMA1P25391 DUSP5P1-201ENST00000441325 1139 ntBASIC19.71■□□□□ 0.75
LAMA1P25391 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.71■□□□□ 0.75
LAMA1P25391 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.71■□□□□ 0.75
LAMA1P25391 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.71■□□□□ 0.75
LAMA1P25391 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LAMA1P25391 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.71■□□□□ 0.75
LAMA1P25391 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 INGX-201ENST00000359239 846 ntBASIC19.71■□□□□ 0.75
LAMA1P25391 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.71■□□□□ 0.75
LAMA1P25391 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.71■□□□□ 0.75
LAMA1P25391 AL121894.2-201ENST00000602977 491 ntBASIC19.71■□□□□ 0.75
LAMA1P25391 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LAMA1P25391 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LAMA1P25391 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LAMA1P25391 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 AC026271.3-201ENST00000571884 352 ntBASIC19.7■□□□□ 0.74
LAMA1P25391 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.7■□□□□ 0.74
LAMA1P25391 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.7■□□□□ 0.74
LAMA1P25391 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.7■□□□□ 0.74
LAMA1P25391 MESTP1-201ENST00000404287 994 ntBASIC19.7■□□□□ 0.74
LAMA1P25391 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LAMA1P25391 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.7■□□□□ 0.74
LAMA1P25391 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.7■□□□□ 0.74
LAMA1P25391 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LAMA1P25391 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LAMA1P25391 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LAMA1P25391 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.69■□□□□ 0.74
LAMA1P25391 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LAMA1P25391 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.69■□□□□ 0.74
LAMA1P25391 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.69■□□□□ 0.74
LAMA1P25391 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LAMA1P25391 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.69■□□□□ 0.74
LAMA1P25391 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.69■□□□□ 0.74
LAMA1P25391 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
LAMA1P25391 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.68■□□□□ 0.74
LAMA1P25391 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMA1P25391 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.68■□□□□ 0.74
LAMA1P25391 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMA1P25391 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
LAMA1P25391 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMA1P25391 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LAMA1P25391 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMA1P25391 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LAMA1P25391 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.68■□□□□ 0.74
LAMA1P25391 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
LAMA1P25391 NIFKP9-201ENST00000419265 221 ntBASIC19.68■□□□□ 0.74
LAMA1P25391 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMA1P25391 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.68■□□□□ 0.74
LAMA1P25391 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms