Protein–RNA interactions for Protein: P22528

SPRR1B, Cornifin-B, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPRR1BP22528 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPRR1BP22528 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.02□□□□□ -0.48
SPRR1BP22528 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.02□□□□□ -0.49
SPRR1BP22528 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.02□□□□□ -0.49
SPRR1BP22528 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.02□□□□□ -0.49
SPRR1BP22528 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.02□□□□□ -0.49
SPRR1BP22528 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 AC013268.1-206ENST00000638368 961 ntBASIC12.02□□□□□ -0.49
SPRR1BP22528 AC112229.1-201ENST00000639295 961 ntBASIC12.02□□□□□ -0.49
SPRR1BP22528 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SPRR1BP22528 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.02□□□□□ -0.49
SPRR1BP22528 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC12.02□□□□□ -0.49
SPRR1BP22528 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPRR1BP22528 STK25-205ENST00000405883 1904 ntTSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SPRR1BP22528 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SPRR1BP22528 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC12.01□□□□□ -0.49
SPRR1BP22528 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.01□□□□□ -0.49
SPRR1BP22528 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC12.01□□□□□ -0.49
SPRR1BP22528 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SPRR1BP22528 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC12.01□□□□□ -0.49
SPRR1BP22528 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SPRR1BP22528 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPRR1BP22528 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC12.01□□□□□ -0.49
SPRR1BP22528 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12□□□□□ -0.49
SPRR1BP22528 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 MIR638-201ENST00000385237 100 ntBASIC12□□□□□ -0.49
SPRR1BP22528 MCRIP2P1-201ENST00000394346 511 ntBASIC12□□□□□ -0.49
SPRR1BP22528 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 KRT18P11-201ENST00000435214 1283 ntBASIC12□□□□□ -0.49
SPRR1BP22528 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SPRR1BP22528 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC12□□□□□ -0.49
SPRR1BP22528 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC12□□□□□ -0.49
SPRR1BP22528 KRT18P61-201ENST00000585825 1298 ntBASIC12□□□□□ -0.49
SPRR1BP22528 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SPRR1BP22528 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12□□□□□ -0.49
SPRR1BP22528 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms