Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CXCL3P19876 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL3P19876 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CXCL3P19876 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCL3P19876 pRNA.6-201ENST00000610482 90 ntBASIC16.81■□□□□ 0.28
CXCL3P19876 pRNA.5-201ENST00000612139 90 ntBASIC16.81■□□□□ 0.28
CXCL3P19876 pRNA.11-201ENST00000618423 90 ntBASIC16.81■□□□□ 0.28
CXCL3P19876 pRNA.13-201ENST00000619112 90 ntBASIC16.81■□□□□ 0.28
CXCL3P19876 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL3P19876 AC012313.1-201ENST00000593393 3059 ntBASIC16.81■□□□□ 0.28
CXCL3P19876 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CXCL3P19876 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL3P19876 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL3P19876 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCL3P19876 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CXCL3P19876 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CXCL3P19876 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCL3P19876 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL3P19876 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL3P19876 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
CXCL3P19876 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL3P19876 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL3P19876 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CXCL3P19876 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CXCL3P19876 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CXCL3P19876 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL3P19876 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CXCL3P19876 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCL3P19876 BX664725.1-201ENST00000438252 379 ntBASIC16.8■□□□□ 0.28
CXCL3P19876 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCL3P19876 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.8■□□□□ 0.28
CXCL3P19876 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CXCL3P19876 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL3P19876 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CXCL3P19876 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL3P19876 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCL3P19876 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.8■□□□□ 0.28
CXCL3P19876 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL3P19876 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCL3P19876 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL3P19876 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL3P19876 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.8■□□□□ 0.28
CXCL3P19876 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCL3P19876 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CXCL3P19876 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.79■□□□□ 0.28
CXCL3P19876 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.79■□□□□ 0.28
CXCL3P19876 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.79■□□□□ 0.28
CXCL3P19876 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCL3P19876 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCL3P19876 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.79■□□□□ 0.28
CXCL3P19876 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCL3P19876 AC068880.1-201ENST00000507289 2297 ntBASIC16.79■□□□□ 0.28
CXCL3P19876 NOC2LP2-201ENST00000407594 1944 ntBASIC16.79■□□□□ 0.28
CXCL3P19876 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CXCL3P19876 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.79■□□□□ 0.28
CXCL3P19876 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCL3P19876 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.79■□□□□ 0.28
CXCL3P19876 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCL3P19876 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.79■□□□□ 0.28
CXCL3P19876 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.79■□□□□ 0.28
CXCL3P19876 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CXCL3P19876 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CXCL3P19876 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CXCL3P19876 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCL3P19876 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCL3P19876 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.79■□□□□ 0.28
CXCL3P19876 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 OR2I1P-207ENST00000453522 948 ntBASIC16.78■□□□□ 0.28
CXCL3P19876 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CXCL3P19876 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.78■□□□□ 0.28
CXCL3P19876 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXCL3P19876 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CXCL3P19876 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.78■□□□□ 0.28
CXCL3P19876 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CXCL3P19876 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
CXCL3P19876 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL3P19876 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXCL3P19876 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCL3P19876 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL3P19876 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms