Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXB3P14651 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXB3P14651 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXB3P14651 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXB3P14651 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXB3P14651 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXB3P14651 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXB3P14651 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HOXB3P14651 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXB3P14651 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.61■□□□□ 0.73
HOXB3P14651 AC069544.1-201ENST00000609399 999 ntBASIC19.61■□□□□ 0.73
HOXB3P14651 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HOXB3P14651 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXB3P14651 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXB3P14651 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXB3P14651 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 PGM5P4-201ENST00000421970 445 ntBASIC19.6■□□□□ 0.73
HOXB3P14651 POM121L13P-201ENST00000422362 380 ntBASIC19.6■□□□□ 0.73
HOXB3P14651 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.6■□□□□ 0.73
HOXB3P14651 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HOXB3P14651 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.6■□□□□ 0.73
HOXB3P14651 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HOXB3P14651 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXB3P14651 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXB3P14651 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXB3P14651 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HOXB3P14651 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXB3P14651 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXB3P14651 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXB3P14651 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HOXB3P14651 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXB3P14651 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXB3P14651 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXB3P14651 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HOXB3P14651 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HOXB3P14651 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXB3P14651 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
HOXB3P14651 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXB3P14651 FP700111.2-201ENST00000619190 1892 ntBASIC19.59■□□□□ 0.73
HOXB3P14651 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HOXB3P14651 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXB3P14651 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXB3P14651 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXB3P14651 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
HOXB3P14651 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HOXB3P14651 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXB3P14651 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXB3P14651 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HOXB3P14651 KRT126P-201ENST00000549467 1181 ntBASIC19.59■□□□□ 0.73
HOXB3P14651 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXB3P14651 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXB3P14651 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXB3P14651 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXB3P14651 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXB3P14651 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXB3P14651 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXB3P14651 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXB3P14651 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXB3P14651 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
HOXB3P14651 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HOXB3P14651 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HOXB3P14651 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXB3P14651 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXB3P14651 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.58■□□□□ 0.73
HOXB3P14651 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXB3P14651 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXB3P14651 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXB3P14651 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.58■□□□□ 0.72
HOXB3P14651 AC006557.6-201ENST00000623071 864 ntBASIC19.58■□□□□ 0.72
HOXB3P14651 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.58■□□□□ 0.72
HOXB3P14651 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXB3P14651 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXB3P14651 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXB3P14651 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXB3P14651 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.58■□□□□ 0.72
HOXB3P14651 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HOXB3P14651 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXB3P14651 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXB3P14651 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXB3P14651 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HOXB3P14651 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXB3P14651 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms