Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 TRMT2A-209ENST00000463710 757 ntTSL 319.13■□□□□ 0.651e-14■□□□□ 8.1
XRCC6P12956 TRMT2A-212ENST00000471040 848 ntTSL 319.13■□□□□ 0.651e-14■□□□□ 8.1
XRCC6P12956 TRMT2A-218ENST00000492988 854 ntTSL 518.69■□□□□ 0.581e-14■□□□□ 8.1
XRCC6P12956 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.559e-8■□□□□ 8.1
XRCC6P12956 PI4KA-202ENST00000399213 1636 ntTSL 518.29■□□□□ 0.529e-8■□□□□ 8.1
XRCC6P12956 PI4KA-207ENST00000466772 3109 ntTSL 218.19■□□□□ 0.59e-8■□□□□ 8.1
XRCC6P12956 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.49e-8■□□□□ 8.1
XRCC6P12956 TRMT2A-220ENST00000494820 1098 ntTSL 517.19■□□□□ 0.341e-14■□□□□ 8.1
XRCC6P12956 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.229e-8■□□□□ 8.1
XRCC6P12956 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC16.32■□□□□ 0.29e-8■□□□□ 8.1
XRCC6P12956 PI4KA-209ENST00000477245 3026 ntTSL 1 (best)16.14■□□□□ 0.179e-8■□□□□ 8.1
XRCC6P12956 TRMT2A-208ENST00000459644 582 ntTSL 316.07■□□□□ 0.161e-14■□□□□ 8.1
XRCC6P12956 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.169e-8■□□□□ 8.1
XRCC6P12956 TRMT2A-214ENST00000480460 378 ntTSL 315.88■□□□□ 0.131e-14■□□□□ 8.1
XRCC6P12956 KBTBD2-204ENST00000452926 537 ntTSL 415.8■□□□□ 0.129e-8■□□□□ 8.1
XRCC6P12956 KBTBD2-207ENST00000485611 537 ntTSL 415.8■□□□□ 0.129e-8■□□□□ 8.1
XRCC6P12956 PI4KA-206ENST00000466394 782 ntTSL 515.01□□□□□ -0.019e-8■□□□□ 8.1
XRCC6P12956 PI4KA-217ENST00000492581 3925 ntTSL 214.93□□□□□ -0.029e-8■□□□□ 8.1
XRCC6P12956 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC13.68□□□□□ -0.229e-8■□□□□ 8.1
XRCC6P12956 PSMD2-214ENST00000485937 603 ntTSL 212.96□□□□□ -0.339e-8■□□□□ 8.1
XRCC6P12956 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.369e-8■□□□□ 8.1
XRCC6P12956 PSMD2-207ENST00000445558 825 ntTSL 511.86□□□□□ -0.519e-8■□□□□ 8.1
XRCC6P12956 GART-214ENST00000476524 806 ntTSL 210.01□□□□□ -0.819e-8■□□□□ 8.1
XRCC6P12956 EEF1A1-204ENST00000356303 635 ntTSL 29.9□□□□□ -0.829e-8■□□□□ 8.1
XRCC6P12956 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.849e-8■□□□□ 8.1
XRCC6P12956 GART-202ENST00000366093 805 ntTSL 39.18□□□□□ -0.949e-8■□□□□ 8.1
XRCC6P12956 KBTBD2-203ENST00000424468 593 ntTSL 48.8□□□□□ -19e-8■□□□□ 8.1
XRCC6P12956 GART-207ENST00000426819 837 ntTSL 58.67□□□□□ -1.029e-8■□□□□ 8.1
XRCC6P12956 GART-218ENST00000497313 457 ntTSL 38.65□□□□□ -1.029e-8■□□□□ 8.1
XRCC6P12956 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.19e-8■□□□□ 8.1
XRCC6P12956 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.119e-8■□□□□ 8.1
XRCC6P12956 PSMD2-210ENST00000463602 576 ntTSL 47.62□□□□□ -1.199e-8■□□□□ 8.1
XRCC6P12956 GART-217ENST00000488791 778 ntTSL 37.56□□□□□ -1.29e-8■□□□□ 8.1
XRCC6P12956 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.329e-8■□□□□ 8.1
XRCC6P12956 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.24□□□□□ -1.419e-8■□□□□ 8.1
XRCC6P12956 ATP13A3-208ENST00000485194 586 ntTSL 56.12□□□□□ -1.439e-8■□□□□ 8.1
XRCC6P12956 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.05□□□□□ -1.449e-8■□□□□ 8.1
XRCC6P12956 KBTBD2-205ENST00000453627 724 ntTSL 35.87□□□□□ -1.479e-8■□□□□ 8.1
XRCC6P12956 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.669e-8■□□□□ 8.1
XRCC6P12956 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.69□□□□□ -1.669e-8■□□□□ 8.1
XRCC6P12956 ECT2-212ENST00000444250 627 ntTSL 34.26□□□□□ -1.739e-8■□□□□ 8.1
XRCC6P12956 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.869e-8■□□□□ 8.1
XRCC6P12956 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.039e-8■□□□□ 8.1
XRCC6P12956 PIEZO1-212ENST00000497793 1228 ntTSL 220.7■□□□□ 0.92e-7■□□□□ 8
XRCC6P12956 COLGALT1-203ENST00000597075 737 ntTSL 219.01■□□□□ 0.632e-7■□□□□ 8
XRCC6P12956 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.272e-7■□□□□ 8
XRCC6P12956 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)16.74■□□□□ 0.273e-22■□□□□ 8
XRCC6P12956 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC15.96■□□□□ 0.152e-7■□□□□ 8
XRCC6P12956 COLGALT1-204ENST00000597147 654 ntAPPRIS ALT2 TSL 515.47■□□□□ 0.072e-7■□□□□ 8
XRCC6P12956 PIEZO1-211ENST00000495568 901 ntTSL 213.4□□□□□ -0.262e-7■□□□□ 8
XRCC6P12956 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)10.62□□□□□ -0.713e-22■□□□□ 8
XRCC6P12956 PIEZO1-204ENST00000466823 584 ntTSL 29.13□□□□□ -0.952e-7■□□□□ 8
XRCC6P12956 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -12e-7■□□□□ 8
XRCC6P12956 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.19□□□□□ -1.422e-7■□□□□ 8
XRCC6P12956 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.891e-16■□□□□ 8
XRCC6P12956 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.671e-16■□□□□ 8
XRCC6P12956 FUS-209ENST00000566605 1787 ntTSL 1 (best)30.33■■■□□ 2.452e-18■□□□□ 8
XRCC6P12956 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.042e-18■□□□□ 8
XRCC6P12956 FUS-212ENST00000569760 639 ntTSL 226.1■■□□□ 1.772e-18■□□□□ 8
XRCC6P12956 FUS-203ENST00000474990 827 ntTSL 325.13■■□□□ 1.612e-18■□□□□ 8
XRCC6P12956 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.62e-18■□□□□ 8
XRCC6P12956 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.25■■□□□ 1.471e-9■□□□□ 8
XRCC6P12956 FUS-204ENST00000483853 778 ntTSL 223.42■■□□□ 1.342e-18■□□□□ 8
XRCC6P12956 TELO2-202ENST00000497339 1667 ntTSL 522.93■■□□□ 1.261e-9■□□□□ 8
XRCC6P12956 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.93■□□□□ 0.941e-9■□□□□ 8
XRCC6P12956 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC20.26■□□□□ 0.831e-9■□□□□ 8
XRCC6P12956 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.791e-9■□□□□ 8
XRCC6P12956 DUS1L-204ENST00000542088 1040 ntTSL 319.93■□□□□ 0.781e-9■□□□□ 8
XRCC6P12956 PABPC4-216ENST00000492468 2257 ntTSL 218.98■□□□□ 0.631e-9■□□□□ 8
XRCC6P12956 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.61e-9■□□□□ 8
XRCC6P12956 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.75■□□□□ 0.431e-9■□□□□ 8
XRCC6P12956 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.422e-18■□□□□ 8
XRCC6P12956 DUS1L-209ENST00000578428 688 ntTSL 217.54■□□□□ 0.41e-9■□□□□ 8
XRCC6P12956 DUS1L-205ENST00000577574 473 ntTSL 516.32■□□□□ 0.21e-9■□□□□ 8
XRCC6P12956 FUS-206ENST00000487509 4920 ntTSL 215.78■□□□□ 0.122e-18■□□□□ 8
XRCC6P12956 DUS1L-212ENST00000579854 657 ntTSL 215.72■□□□□ 0.111e-9■□□□□ 8
XRCC6P12956 PABPC4-205ENST00000421687 1663 ntTSL 515.7■□□□□ 0.11e-9■□□□□ 8
XRCC6P12956 PABPC4-219ENST00000525045 765 ntTSL 215.67■□□□□ 0.11e-9■□□□□ 8
XRCC6P12956 PABPC4-208ENST00000461578 193 ntTSL 515.11■□□□□ 0.011e-9■□□□□ 8
XRCC6P12956 DUS1L-216ENST00000584871 676 ntTSL 214.65□□□□□ -0.061e-9■□□□□ 8
XRCC6P12956 PABPC4-212ENST00000477556 413 ntTSL 314.56□□□□□ -0.081e-9■□□□□ 8
XRCC6P12956 PABPC4-215ENST00000484555 450 ntTSL 513.76□□□□□ -0.211e-9■□□□□ 8
XRCC6P12956 PABPC4-206ENST00000437136 876 ntTSL 513.28□□□□□ -0.281e-9■□□□□ 8
XRCC6P12956 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.391e-9■□□□□ 8
XRCC6P12956 PABPC4-209ENST00000468476 3592 ntTSL 211.35□□□□□ -0.591e-9■□□□□ 8
XRCC6P12956 PABPC4-222ENST00000527718 746 ntTSL 57.1□□□□□ -1.271e-9■□□□□ 8
XRCC6P12956 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.23■□□□□ 0.993e-50■□□□□ 8
XRCC6P12956 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.9■□□□□ 0.943e-50■□□□□ 8
Retrieved 88 of 6,788 protein–RNA pairs in 56.3 ms