Protein–RNA interactions for Protein: P0CX62

TY2A-GR2, Transposon Ty2-GR2 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-GR2P0CX62 OLI1Q0130 231 nt1.29□□□□□ -2.2
TY2A-GR2P0CX62 POL5YEL055C 3069 nt1.29□□□□□ -2.2
TY2A-GR2P0CX62 FYV8YGR196C 2454 nt1.29□□□□□ -2.2
TY2A-GR2P0CX62 snR74snR74 88 nt1.28□□□□□ -2.2
TY2A-GR2P0CX62 YGL041CYGL041C 204 nt1.28□□□□□ -2.2
TY2A-GR2P0CX62 CDC25YLR310C 4770 nt1.27□□□□□ -2.21
TY2A-GR2P0CX62 STB6YKL072W 2301 nt1.27□□□□□ -2.21
TY2A-GR2P0CX62 NUP157YER105C 4176 nt1.27□□□□□ -2.21
TY2A-GR2P0CX62 YLL019W-AYLL019W-A 93 nt1.26□□□□□ -2.21
TY2A-GR2P0CX62 RSM22YKL155C 1887 nt1.26□□□□□ -2.21
TY2A-GR2P0CX62 YDR354C-AYDR354C-A 144 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 tH(GUG)E1tH(GUG)E1 72 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 tH(GUG)E2tH(GUG)E2 72 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 tH(GUG)G1tH(GUG)G1 72 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 tH(GUG)G2tH(GUG)G2 72 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 tH(GUG)HtH(GUG)H 72 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 tH(GUG)KtH(GUG)K 72 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 tH(GUG)MtH(GUG)M 72 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 YIR030W-AYIR030W-A 384 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 HKR1YDR420W 5409 nt1.25□□□□□ -2.21
TY2A-GR2P0CX62 snR80snR80 171 nt1.24□□□□□ -2.21
TY2A-GR2P0CX62 YMR158W-BYMR158W-B 321 nt1.24□□□□□ -2.21
TY2A-GR2P0CX62 CDC39YCR093W 6327 nt1.24□□□□□ -2.21
TY2A-GR2P0CX62 APL1YJR005W 2103 nt1.24□□□□□ -2.21
TY2A-GR2P0CX62 PAA1YDR071C 576 nt1.23□□□□□ -2.21
TY2A-GR2P0CX62 YBR182C-AYBR182C-A 195 nt1.23□□□□□ -2.21
TY2A-GR2P0CX62 YKU70YMR284W 1809 nt1.22□□□□□ -2.21
TY2A-GR2P0CX62 CMC4YMR194C-B 222 nt1.22□□□□□ -2.21
TY2A-GR2P0CX62 YNL211CYNL211C 261 nt1.22□□□□□ -2.21
TY2A-GR2P0CX62 NOP9YJL010C 2001 nt1.22□□□□□ -2.21
TY2A-GR2P0CX62 GEA2YEL022W 4380 nt1.21□□□□□ -2.22
TY2A-GR2P0CX62 NPR2YEL062W 1848 nt1.2□□□□□ -2.22
TY2A-GR2P0CX62 YJL026C-AYJL026C-A 222 nt1.2□□□□□ -2.22
TY2A-GR2P0CX62 YAL067W-AYAL067W-A 228 nt1.2□□□□□ -2.22
TY2A-GR2P0CX62 YDL196WYDL196W 330 nt1.19□□□□□ -2.22
TY2A-GR2P0CX62 IML1YJR138W 4755 nt1.19□□□□□ -2.22
TY2A-GR2P0CX62 ISD11YER048W-A 285 nt1.18□□□□□ -2.22
TY2A-GR2P0CX62 RPL33BYOR234C 324 nt1.18□□□□□ -2.22
TY2A-GR2P0CX62 YPL044CYPL044C 549 nt1.18□□□□□ -2.22
TY2A-GR2P0CX62 YGR130CYGR130C 2451 nt1.16□□□□□ -2.22
TY2A-GR2P0CX62 RAD9YDR217C 3930 nt1.15□□□□□ -2.22
TY2A-GR2P0CX62 KAP120YPL125W 3099 nt1.15□□□□□ -2.22
TY2A-GR2P0CX62 SPG3YDR504C 384 nt1.15□□□□□ -2.23
TY2A-GR2P0CX62 RPL26BYGR034W 384 nt1.15□□□□□ -2.23
TY2A-GR2P0CX62 YOR302WYOR302W 78 nt1.15□□□□□ -2.23
TY2A-GR2P0CX62 TTI1YKL033W 3117 nt1.13□□□□□ -2.23
TY2A-GR2P0CX62 YCR018C-AYCR018C-A 255 nt1.11□□□□□ -2.23
TY2A-GR2P0CX62 ULI1YFR026C 510 nt1.11□□□□□ -2.23
TY2A-GR2P0CX62 YIL020C-AYIL020C-A 339 nt1.11□□□□□ -2.23
TY2A-GR2P0CX62 tV(UAC)BtV(UAC)B 74 nt1.11□□□□□ -2.23
TY2A-GR2P0CX62 tV(UAC)DtV(UAC)D 74 nt1.11□□□□□ -2.23
TY2A-GR2P0CX62 SIP4YJL089W 2490 nt1.11□□□□□ -2.23
TY2A-GR2P0CX62 SPT7YBR081C 3999 nt1.09□□□□□ -2.23
TY2A-GR2P0CX62 BLI1YKL061W 342 nt1.09□□□□□ -2.23
TY2A-GR2P0CX62 YDL185C-AYDL185C-A 228 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 YFR012W-AYFR012W-A 87 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 YMR046W-AYMR046W-A 129 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 JLP2YMR132C 627 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 RPS30BYOR182C 192 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 YOR345CYOR345C 351 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 YNL284C-BYNL284C-B 5268 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 ASE1YOR058C 2658 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 COY1YKL179C 2040 nt1.08□□□□□ -2.24
TY2A-GR2P0CX62 NST1YNL091W 3723 nt1.07□□□□□ -2.24
TY2A-GR2P0CX62 YGL123C-AYGL123C-A 231 nt1.07□□□□□ -2.24
TY2A-GR2P0CX62 tM(CAU)Q1tM(CAU)Q1 76 nt1.07□□□□□ -2.24
TY2A-GR2P0CX62 APQ12YIL040W 417 nt1.07□□□□□ -2.24
TY2A-GR2P0CX62 YKL100W-AYKL100W-A 90 nt1.07□□□□□ -2.24
TY2A-GR2P0CX62 COX12YLR038C 252 nt1.07□□□□□ -2.24
TY2A-GR2P0CX62 YBR131C-AYBR131C-A 90 nt1.07□□□□□ -2.24
TY2A-GR2P0CX62 snR190snR190 190 nt1.06□□□□□ -2.24
TY2A-GR2P0CX62 PMP1YCR024C-A 123 nt1.05□□□□□ -2.24
TY2A-GR2P0CX62 YLR282CYLR282C 342 nt1.05□□□□□ -2.24
TY2A-GR2P0CX62 SEC8YPR055W 3198 nt1.05□□□□□ -2.24
TY2A-GR2P0CX62 BFR2YDR299W 1605 nt1.04□□□□□ -2.24
TY2A-GR2P0CX62 COX5BYIL111W 456 nt1.04□□□□□ -2.24
TY2A-GR2P0CX62 HAL9YOL089C 3093 nt1.04□□□□□ -2.24
TY2A-GR2P0CX62 PRP16YKR086W 3216 nt1.03□□□□□ -2.24
TY2A-GR2P0CX62 YIL134C-AYIL134C-A 204 nt1.03□□□□□ -2.24
TY2A-GR2P0CX62 YDR406W-AYDR406W-A 246 nt1.02□□□□□ -2.25
TY2A-GR2P0CX62 YNL097C-BYNL097C-B 123 nt1.02□□□□□ -2.25
TY2A-GR2P0CX62 YCR038W-AYCR038W-A 126 nt1.01□□□□□ -2.25
TY2A-GR2P0CX62 YOR161W-AYOR161W-A 81 nt1.01□□□□□ -2.25
TY2A-GR2P0CX62 YML002WYML002W 2214 nt1.01□□□□□ -2.25
TY2A-GR2P0CX62 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
TY2A-GR2P0CX62 SCC2YDR180W 4482 nt1.01□□□□□ -2.25
TY2A-GR2P0CX62 YEL014CYEL014C 306 nt1□□□□□ -2.25
TY2A-GR2P0CX62 YIL002W-AYIL002W-A 210 nt1□□□□□ -2.25
TY2A-GR2P0CX62 PAM16YJL104W 450 nt0.99□□□□□ -2.25
TY2A-GR2P0CX62 YLR399W-AYLR399W-A 105 nt0.98□□□□□ -2.25
TY2A-GR2P0CX62 YPR117WYPR117W 7470 nt0.97□□□□□ -2.25
TY2A-GR2P0CX62 YER053C-AYER053C-A 114 nt0.97□□□□□ -2.25
TY2A-GR2P0CX62 YPR160W-AYPR160W-A 81 nt0.97□□□□□ -2.25
TY2A-GR2P0CX62 YJR029WYJR029W 5268 nt0.95□□□□□ -2.26
TY2A-GR2P0CX62 YPR137C-BYPR137C-B 5268 nt0.95□□□□□ -2.26
TY2A-GR2P0CX62 YDL073WYDL073W 2955 nt0.94□□□□□ -2.26
TY2A-GR2P0CX62 YLR041WYLR041W 321 nt0.94□□□□□ -2.26
TY2A-GR2P0CX62 FYV10YIL097W 1551 nt0.94□□□□□ -2.26
TY2A-GR2P0CX62 UTP8YGR128C 2142 nt0.92□□□□□ -2.26
TY2A-GR2P0CX62 BEM2YER155C 6504 nt0.91□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms