Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 C2orf69P4-201ENST00000565394 541 ntBASIC20.77■□□□□ 0.92
CD48P09326 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.77■□□□□ 0.92
CD48P09326 AC092666.2-201ENST00000613287 246 ntBASIC20.77■□□□□ 0.92
CD48P09326 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.77■□□□□ 0.92
CD48P09326 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.77■□□□□ 0.92
CD48P09326 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD48P09326 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CD48P09326 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CD48P09326 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD48P09326 KRT8P17-201ENST00000453110 1448 ntBASIC20.77■□□□□ 0.91
CD48P09326 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.77■□□□□ 0.91
CD48P09326 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD48P09326 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.76■□□□□ 0.91
CD48P09326 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CD48P09326 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD48P09326 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD48P09326 BX276092.2-201ENST00000417668 665 ntBASIC20.76■□□□□ 0.91
CD48P09326 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.76■□□□□ 0.91
CD48P09326 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.76■□□□□ 0.91
CD48P09326 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.76■□□□□ 0.91
CD48P09326 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CD48P09326 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.76■□□□□ 0.91
CD48P09326 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CD48P09326 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD48P09326 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD48P09326 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD48P09326 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD48P09326 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD48P09326 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD48P09326 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CD48P09326 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD48P09326 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD48P09326 LSM12P1-201ENST00000411836 588 ntBASIC20.75■□□□□ 0.91
CD48P09326 AC006970.2-201ENST00000450065 779 ntBASIC20.75■□□□□ 0.91
CD48P09326 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.75■□□□□ 0.91
CD48P09326 AC083906.2-201ENST00000511578 360 ntBASIC20.75■□□□□ 0.91
CD48P09326 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.75■□□□□ 0.91
CD48P09326 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.75■□□□□ 0.91
CD48P09326 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD48P09326 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD48P09326 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.75■□□□□ 0.91
CD48P09326 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD48P09326 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.74■□□□□ 0.91
CD48P09326 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 GUSBP6-202ENST00000438529 1198 ntBASIC20.74■□□□□ 0.91
CD48P09326 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.74■□□□□ 0.91
CD48P09326 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 AL158211.5-201ENST00000623583 2518 ntBASIC20.74■□□□□ 0.91
CD48P09326 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CD48P09326 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD48P09326 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CD48P09326 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.73■□□□□ 0.91
CD48P09326 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.73■□□□□ 0.91
CD48P09326 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CD48P09326 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.73■□□□□ 0.91
CD48P09326 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CD48P09326 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.73■□□□□ 0.91
CD48P09326 AL031963.3-201ENST00000606441 850 ntBASIC20.73■□□□□ 0.91
CD48P09326 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
CD48P09326 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CD48P09326 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.73■□□□□ 0.91
CD48P09326 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD48P09326 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CD48P09326 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CD48P09326 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.72■□□□□ 0.91
CD48P09326 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 MIPEPP3-201ENST00000412105 444 ntBASIC20.72■□□□□ 0.91
CD48P09326 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CD48P09326 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.72■□□□□ 0.91
CD48P09326 AL121832.2-201ENST00000610979 668 ntBASIC20.72■□□□□ 0.91
CD48P09326 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms