Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN1P07384 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN1P07384 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CAPN1P07384 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CAPN1P07384 AC010980.2-201ENST00000587099 1412 ntBASIC19.68■□□□□ 0.74
CAPN1P07384 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN1P07384 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN1P07384 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN1P07384 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN1P07384 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN1P07384 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN1P07384 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CAPN1P07384 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN1P07384 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN1P07384 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CAPN1P07384 BX276092.2-201ENST00000417668 665 ntBASIC19.67■□□□□ 0.74
CAPN1P07384 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN1P07384 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CAPN1P07384 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CAPN1P07384 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
CAPN1P07384 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN1P07384 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN1P07384 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN1P07384 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN1P07384 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CAPN1P07384 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN1P07384 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN1P07384 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CAPN1P07384 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CAPN1P07384 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.66■□□□□ 0.74
CAPN1P07384 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CAPN1P07384 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN1P07384 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.66■□□□□ 0.74
CAPN1P07384 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN1P07384 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN1P07384 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.66■□□□□ 0.74
CAPN1P07384 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 KRT8P36-201ENST00000489121 1440 ntBASIC19.66■□□□□ 0.74
CAPN1P07384 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN1P07384 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.65■□□□□ 0.74
CAPN1P07384 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPN1P07384 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.65■□□□□ 0.74
CAPN1P07384 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPN1P07384 CDV3P1-201ENST00000471403 739 ntBASIC19.65■□□□□ 0.74
CAPN1P07384 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPN1P07384 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.65■□□□□ 0.74
CAPN1P07384 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPN1P07384 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CAPN1P07384 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN1P07384 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CAPN1P07384 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.64■□□□□ 0.73
CAPN1P07384 FAM21FP-204ENST00000608637 956 ntBASIC19.64■□□□□ 0.73
CAPN1P07384 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CAPN1P07384 MYC-209ENST00000641252 345 ntBASIC19.64■□□□□ 0.73
CAPN1P07384 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.64■□□□□ 0.73
CAPN1P07384 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 TCF3P1-201ENST00000423021 1937 ntBASIC19.64■□□□□ 0.73
CAPN1P07384 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.64■□□□□ 0.73
CAPN1P07384 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN1P07384 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.63■□□□□ 0.73
CAPN1P07384 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CAPN1P07384 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.63■□□□□ 0.73
CAPN1P07384 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPN1P07384 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CAPN1P07384 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.63■□□□□ 0.73
CAPN1P07384 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPN1P07384 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms