Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HMGN1P05114 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGN1P05114 TERF1P2-201ENST00000583350 1212 ntBASIC18.11■□□□□ 0.49
HMGN1P05114 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGN1P05114 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HMGN1P05114 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGN1P05114 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGN1P05114 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGN1P05114 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGN1P05114 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMGN1P05114 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGN1P05114 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGN1P05114 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGN1P05114 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGN1P05114 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGN1P05114 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGN1P05114 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGN1P05114 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGN1P05114 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HMGN1P05114 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.1■□□□□ 0.49
HMGN1P05114 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMGN1P05114 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGN1P05114 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HMGN1P05114 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGN1P05114 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGN1P05114 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HMGN1P05114 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
HMGN1P05114 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGN1P05114 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGN1P05114 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGN1P05114 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HMGN1P05114 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 AC019069.1-201ENST00000610008 1333 ntBASIC18.09■□□□□ 0.49
HMGN1P05114 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGN1P05114 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.09■□□□□ 0.49
HMGN1P05114 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HMGN1P05114 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
HMGN1P05114 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGN1P05114 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
HMGN1P05114 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HMGN1P05114 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGN1P05114 AC138932.1-201ENST00000534164 6830 ntBASIC18.09■□□□□ 0.49
HMGN1P05114 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.09■□□□□ 0.49
HMGN1P05114 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGN1P05114 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGN1P05114 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
HMGN1P05114 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGN1P05114 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGN1P05114 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGN1P05114 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGN1P05114 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HMGN1P05114 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMGN1P05114 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGN1P05114 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGN1P05114 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGN1P05114 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HMGN1P05114 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGN1P05114 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGN1P05114 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGN1P05114 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.08■□□□□ 0.48
HMGN1P05114 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HMGN1P05114 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
HMGN1P05114 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGN1P05114 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGN1P05114 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGN1P05114 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGN1P05114 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HMGN1P05114 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
HMGN1P05114 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGN1P05114 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGN1P05114 AC005332.7-201ENST00000614046 2005 ntBASIC18.08■□□□□ 0.48
HMGN1P05114 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGN1P05114 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGN1P05114 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGN1P05114 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HMGN1P05114 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms