Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHRNA1P02708 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.91■■□□□ 1.1
CHRNA1P02708 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA1P02708 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CHRNA1P02708 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA1P02708 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.91■■□□□ 1.1
CHRNA1P02708 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA1P02708 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CHRNA1P02708 RCN1P1-201ENST00000400413 996 ntBASIC21.91■■□□□ 1.1
CHRNA1P02708 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.91■■□□□ 1.1
CHRNA1P02708 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA1P02708 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.91■■□□□ 1.1
CHRNA1P02708 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.91■■□□□ 1.1
CHRNA1P02708 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.91■■□□□ 1.1
CHRNA1P02708 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA1P02708 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA1P02708 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA1P02708 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.91■■□□□ 1.1
CHRNA1P02708 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA1P02708 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CHRNA1P02708 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CHRNA1P02708 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.9■■□□□ 1.1
CHRNA1P02708 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CHRNA1P02708 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA1P02708 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHRNA1P02708 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CHRNA1P02708 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CHRNA1P02708 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHRNA1P02708 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA1P02708 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA1P02708 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA1P02708 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.9■■□□□ 1.1
CHRNA1P02708 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.9■■□□□ 1.1
CHRNA1P02708 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.9■■□□□ 1.1
CHRNA1P02708 MMP23A-201ENST00000234610 1017 ntBASIC21.9■■□□□ 1.1
CHRNA1P02708 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA1P02708 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CHRNA1P02708 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.9■■□□□ 1.1
CHRNA1P02708 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.9■■□□□ 1.1
CHRNA1P02708 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA1P02708 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA1P02708 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CHRNA1P02708 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA1P02708 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.9■■□□□ 1.1
CHRNA1P02708 KRT8P17-201ENST00000453110 1448 ntBASIC21.89■■□□□ 1.1
CHRNA1P02708 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CHRNA1P02708 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.89■■□□□ 1.1
CHRNA1P02708 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA1P02708 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA1P02708 NUDT16P1-203ENST00000513809 620 ntBASIC21.89■■□□□ 1.09
CHRNA1P02708 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA1P02708 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA1P02708 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA1P02708 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA1P02708 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA1P02708 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA1P02708 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA1P02708 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA1P02708 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA1P02708 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA1P02708 AP002982.1-201ENST00000492365 877 ntBASIC21.88■■□□□ 1.09
CHRNA1P02708 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.88■■□□□ 1.09
CHRNA1P02708 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.88■■□□□ 1.09
CHRNA1P02708 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CHRNA1P02708 AC005229.4-201ENST00000610085 2198 ntBASIC21.88■■□□□ 1.09
CHRNA1P02708 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA1P02708 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CHRNA1P02708 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CHRNA1P02708 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHRNA1P02708 RBM17P1-201ENST00000453646 1190 ntBASIC21.87■■□□□ 1.09
CHRNA1P02708 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHRNA1P02708 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.87■■□□□ 1.09
CHRNA1P02708 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.87■■□□□ 1.09
CHRNA1P02708 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHRNA1P02708 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.87■■□□□ 1.09
CHRNA1P02708 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.87■■□□□ 1.09
CHRNA1P02708 REXO1L10P-201ENST00000615707 1290 ntBASIC21.87■■□□□ 1.09
CHRNA1P02708 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHRNA1P02708 FP700111.2-201ENST00000619190 1892 ntBASIC21.87■■□□□ 1.09
CHRNA1P02708 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHRNA1P02708 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHRNA1P02708 AC079598.2-202ENST00000546624 1451 ntBASIC21.86■■□□□ 1.09
CHRNA1P02708 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHRNA1P02708 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHRNA1P02708 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHRNA1P02708 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CHRNA1P02708 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHRNA1P02708 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.86■■□□□ 1.09
CHRNA1P02708 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.86■■□□□ 1.09
CHRNA1P02708 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.86■■□□□ 1.09
CHRNA1P02708 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.86■■□□□ 1.09
CHRNA1P02708 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.86■■□□□ 1.09
CHRNA1P02708 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHRNA1P02708 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.86■■□□□ 1.09
CHRNA1P02708 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.86■■□□□ 1.09
CHRNA1P02708 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.86■■□□□ 1.09
CHRNA1P02708 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
CHRNA1P02708 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
CHRNA1P02708 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.85■■□□□ 1.09
CHRNA1P02708 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms