Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
IFNB1P01574 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IFNB1P01574 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFNB1P01574 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
IFNB1P01574 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFNB1P01574 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IFNB1P01574 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFNB1P01574 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IFNB1P01574 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.69■□□□□ 0.9
IFNB1P01574 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFNB1P01574 CYP21A1P-202ENST00000354927 1481 ntBASIC20.69■□□□□ 0.9
IFNB1P01574 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFNB1P01574 AL158211.5-201ENST00000623583 2518 ntBASIC20.69■□□□□ 0.9
IFNB1P01574 BX119927.1-201ENST00000636596 1552 ntBASIC20.69■□□□□ 0.9
IFNB1P01574 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFNB1P01574 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFNB1P01574 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFNB1P01574 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
IFNB1P01574 AC137761.2-201ENST00000561729 223 ntBASIC20.69■□□□□ 0.9
IFNB1P01574 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.69■□□□□ 0.9
IFNB1P01574 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.69■□□□□ 0.9
IFNB1P01574 AC145350.3-201ENST00000569033 163 ntBASIC20.69■□□□□ 0.9
IFNB1P01574 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
IFNB1P01574 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IFNB1P01574 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.69■□□□□ 0.9
IFNB1P01574 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IFNB1P01574 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
IFNB1P01574 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFNB1P01574 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.68■□□□□ 0.9
IFNB1P01574 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
IFNB1P01574 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.68■□□□□ 0.9
IFNB1P01574 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.68■□□□□ 0.9
IFNB1P01574 AC016405.3-201ENST00000607710 860 ntBASIC20.68■□□□□ 0.9
IFNB1P01574 MIR6821-201ENST00000617625 74 ntBASIC20.68■□□□□ 0.9
IFNB1P01574 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
IFNB1P01574 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
IFNB1P01574 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
IFNB1P01574 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFNB1P01574 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.67■□□□□ 0.9
IFNB1P01574 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFNB1P01574 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IFNB1P01574 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
IFNB1P01574 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.67■□□□□ 0.9
IFNB1P01574 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
IFNB1P01574 KRT18P11-201ENST00000435214 1283 ntBASIC20.67■□□□□ 0.9
IFNB1P01574 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.67■□□□□ 0.9
IFNB1P01574 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.67■□□□□ 0.9
IFNB1P01574 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IFNB1P01574 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.67■□□□□ 0.9
IFNB1P01574 AC013268.1-206ENST00000638368 961 ntBASIC20.67■□□□□ 0.9
IFNB1P01574 AC112229.1-201ENST00000639295 961 ntBASIC20.67■□□□□ 0.9
IFNB1P01574 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IFNB1P01574 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IFNB1P01574 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFNB1P01574 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.67■□□□□ 0.9
IFNB1P01574 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.66■□□□□ 0.9
IFNB1P01574 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.66■□□□□ 0.9
IFNB1P01574 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
IFNB1P01574 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.66■□□□□ 0.9
IFNB1P01574 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.66■□□□□ 0.9
IFNB1P01574 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
IFNB1P01574 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.66■□□□□ 0.9
IFNB1P01574 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
IFNB1P01574 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
IFNB1P01574 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNB1P01574 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNB1P01574 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNB1P01574 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms