Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC006015.1-201ENST00000429970 570 ntBASIC20.24■□□□□ 0.83
USP1O94782 CNN2P6-201ENST00000439038 900 ntBASIC20.24■□□□□ 0.83
USP1O94782 RARRES2P4-201ENST00000514074 484 ntBASIC20.24■□□□□ 0.83
USP1O94782 DUX4L16-201ENST00000555130 1264 ntBASIC20.24■□□□□ 0.83
USP1O94782 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
USP1O94782 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
USP1O94782 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP1O94782 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
USP1O94782 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP1O94782 AL691432.2-201ENST00000607222 2038 ntBASIC20.24■□□□□ 0.83
USP1O94782 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP1O94782 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
USP1O94782 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.24■□□□□ 0.83
USP1O94782 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.23■□□□□ 0.83
USP1O94782 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
USP1O94782 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP1O94782 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.23■□□□□ 0.83
USP1O94782 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP1O94782 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.23■□□□□ 0.83
USP1O94782 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
USP1O94782 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.23■□□□□ 0.83
USP1O94782 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP1O94782 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP1O94782 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
USP1O94782 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
USP1O94782 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.22■□□□□ 0.83
USP1O94782 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.22■□□□□ 0.83
USP1O94782 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
USP1O94782 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP1O94782 AC068338.2-201ENST00000563278 1430 ntBASIC20.22■□□□□ 0.83
USP1O94782 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 MCRIP2P1-201ENST00000394346 511 ntBASIC20.22■□□□□ 0.83
USP1O94782 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.22■□□□□ 0.83
USP1O94782 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.22■□□□□ 0.83
USP1O94782 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.22■□□□□ 0.83
USP1O94782 IKBKGP1-201ENST00000612193 1073 ntBASIC20.22■□□□□ 0.83
USP1O94782 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.22■□□□□ 0.83
USP1O94782 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
USP1O94782 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP1O94782 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.21■□□□□ 0.83
USP1O94782 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
USP1O94782 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP1O94782 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.21■□□□□ 0.83
USP1O94782 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USP1O94782 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
USP1O94782 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP1O94782 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USP1O94782 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.21■□□□□ 0.83
USP1O94782 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP1O94782 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
USP1O94782 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP1O94782 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
USP1O94782 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP1O94782 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP1O94782 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
USP1O94782 TMEM179-206ENST00000616017 1645 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms