Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.35■□□□□ 0.69
CNOT3O75175 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.35■□□□□ 0.69
CNOT3O75175 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.35■□□□□ 0.69
CNOT3O75175 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.35■□□□□ 0.69
CNOT3O75175 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.35■□□□□ 0.69
CNOT3O75175 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 AC008687.6-201ENST00000596318 630 ntBASIC19.35■□□□□ 0.69
CNOT3O75175 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CNOT3O75175 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT3O75175 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.34■□□□□ 0.69
CNOT3O75175 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.34■□□□□ 0.69
CNOT3O75175 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.34■□□□□ 0.69
CNOT3O75175 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.34■□□□□ 0.69
CNOT3O75175 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.34■□□□□ 0.69
CNOT3O75175 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
CNOT3O75175 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 AL589743.5-201ENST00000616611 1050 ntBASIC19.34■□□□□ 0.69
CNOT3O75175 ITM2C-210ENST00000620962 501 ntBASIC19.34■□□□□ 0.69
CNOT3O75175 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.34■□□□□ 0.69
CNOT3O75175 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT3O75175 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNOT3O75175 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNOT3O75175 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.33■□□□□ 0.69
CNOT3O75175 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNOT3O75175 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT3O75175 PRORSD1P-201ENST00000295112 541 ntBASIC19.33■□□□□ 0.68
CNOT3O75175 ESRRAP1-201ENST00000400596 1257 ntBASIC19.33■□□□□ 0.68
CNOT3O75175 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.33■□□□□ 0.68
CNOT3O75175 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.33■□□□□ 0.68
CNOT3O75175 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CNOT3O75175 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.33■□□□□ 0.68
CNOT3O75175 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.33■□□□□ 0.68
CNOT3O75175 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT3O75175 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CNOT3O75175 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT3O75175 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.32■□□□□ 0.68
CNOT3O75175 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CNOT3O75175 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.32■□□□□ 0.68
CNOT3O75175 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.32■□□□□ 0.68
CNOT3O75175 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.32■□□□□ 0.68
CNOT3O75175 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.32■□□□□ 0.68
CNOT3O75175 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CNOT3O75175 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.32■□□□□ 0.68
CNOT3O75175 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CNOT3O75175 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT3O75175 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CNOT3O75175 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.31■□□□□ 0.68
CNOT3O75175 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CNOT3O75175 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.31■□□□□ 0.68
CNOT3O75175 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.31■□□□□ 0.68
CNOT3O75175 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.31■□□□□ 0.68
CNOT3O75175 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.31■□□□□ 0.68
CNOT3O75175 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.31■□□□□ 0.68
CNOT3O75175 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 UNC93B5-201ENST00000530315 699 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms