Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX1O43933 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.46■□□□□ 0.71
PEX1O43933 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.46■□□□□ 0.71
PEX1O43933 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PEX1O43933 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PEX1O43933 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX1O43933 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.45■□□□□ 0.7
PEX1O43933 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX1O43933 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.45■□□□□ 0.7
PEX1O43933 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
PEX1O43933 UBE2DNL-204ENST00000602536 740 ntBASIC19.45■□□□□ 0.7
PEX1O43933 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.45■□□□□ 0.7
PEX1O43933 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PEX1O43933 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.45■□□□□ 0.7
PEX1O43933 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PEX1O43933 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PEX1O43933 AC026471.1-201ENST00000564629 3026 ntBASIC19.45■□□□□ 0.7
PEX1O43933 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PEX1O43933 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PEX1O43933 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PEX1O43933 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.45■□□□□ 0.7
PEX1O43933 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.44■□□□□ 0.7
PEX1O43933 AC125437.2-201ENST00000625180 2167 ntBASIC19.44■□□□□ 0.7
PEX1O43933 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.44■□□□□ 0.7
PEX1O43933 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PEX1O43933 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.44■□□□□ 0.7
PEX1O43933 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.44■□□□□ 0.7
PEX1O43933 AC138907.5-202ENST00000569484 235 ntBASIC19.44■□□□□ 0.7
PEX1O43933 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 MFSD11-216ENST00000590393 1141 ntBASIC19.44■□□□□ 0.7
PEX1O43933 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.44■□□□□ 0.7
PEX1O43933 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.44■□□□□ 0.7
PEX1O43933 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PEX1O43933 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PEX1O43933 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX1O43933 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX1O43933 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.43■□□□□ 0.7
PEX1O43933 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX1O43933 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX1O43933 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.43■□□□□ 0.7
PEX1O43933 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PEX1O43933 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PEX1O43933 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PEX1O43933 AC010141.2-201ENST00000452426 721 ntBASIC19.43■□□□□ 0.7
PEX1O43933 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX1O43933 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.43■□□□□ 0.7
PEX1O43933 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.43■□□□□ 0.7
PEX1O43933 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PEX1O43933 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PEX1O43933 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PEX1O43933 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PEX1O43933 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.42■□□□□ 0.7
PEX1O43933 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PEX1O43933 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.42■□□□□ 0.7
PEX1O43933 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.42■□□□□ 0.7
PEX1O43933 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.42■□□□□ 0.7
PEX1O43933 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.42■□□□□ 0.7
PEX1O43933 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.42■□□□□ 0.7
PEX1O43933 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.42■□□□□ 0.7
PEX1O43933 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PEX1O43933 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.41■□□□□ 0.7
PEX1O43933 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX1O43933 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PEX1O43933 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX1O43933 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PEX1O43933 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX1O43933 HLA-L-209ENST00000420110 1011 ntBASIC19.41■□□□□ 0.7
PEX1O43933 AC006970.2-201ENST00000450065 779 ntBASIC19.41■□□□□ 0.7
PEX1O43933 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.41■□□□□ 0.7
PEX1O43933 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX1O43933 EEF1DP3-203ENST00000566025 782 ntBASIC19.41■□□□□ 0.7
PEX1O43933 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.41■□□□□ 0.7
PEX1O43933 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.41■□□□□ 0.7
PEX1O43933 AC053503.5-201ENST00000601508 636 ntBASIC19.41■□□□□ 0.7
PEX1O43933 MYCNOS-205ENST00000641950 531 ntBASIC19.41■□□□□ 0.7
PEX1O43933 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PEX1O43933 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX1O43933 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms