Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.27■□□□□ 0.84
SMAD6O43541 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
SMAD6O43541 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD6O43541 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD6O43541 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD6O43541 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD6O43541 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMAD6O43541 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SMAD6O43541 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD6O43541 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD6O43541 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.27■□□□□ 0.84
SMAD6O43541 AL023875.1-201ENST00000640777 796 ntBASIC20.27■□□□□ 0.84
SMAD6O43541 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMAD6O43541 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SMAD6O43541 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMAD6O43541 AL157384.1-201ENST00000445995 2473 ntBASIC20.27■□□□□ 0.83
SMAD6O43541 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SMAD6O43541 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.27■□□□□ 0.83
SMAD6O43541 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.26■□□□□ 0.83
SMAD6O43541 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SMAD6O43541 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.26■□□□□ 0.83
SMAD6O43541 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.26■□□□□ 0.83
SMAD6O43541 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.26■□□□□ 0.83
SMAD6O43541 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.26■□□□□ 0.83
SMAD6O43541 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.26■□□□□ 0.83
SMAD6O43541 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.26■□□□□ 0.83
SMAD6O43541 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.26■□□□□ 0.83
SMAD6O43541 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
SMAD6O43541 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SMAD6O43541 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
SMAD6O43541 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMAD6O43541 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.26■□□□□ 0.83
SMAD6O43541 AL512408.1-201ENST00000569378 2000 ntBASIC20.26■□□□□ 0.83
SMAD6O43541 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.25■□□□□ 0.83
SMAD6O43541 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SMAD6O43541 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.25■□□□□ 0.83
SMAD6O43541 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SMAD6O43541 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.25■□□□□ 0.83
SMAD6O43541 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.25■□□□□ 0.83
SMAD6O43541 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.25■□□□□ 0.83
SMAD6O43541 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.25■□□□□ 0.83
SMAD6O43541 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SMAD6O43541 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.25■□□□□ 0.83
SMAD6O43541 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SMAD6O43541 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.25■□□□□ 0.83
SMAD6O43541 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.25■□□□□ 0.83
SMAD6O43541 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
SMAD6O43541 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMAD6O43541 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.24■□□□□ 0.83
SMAD6O43541 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.24■□□□□ 0.83
SMAD6O43541 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.24■□□□□ 0.83
SMAD6O43541 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SMAD6O43541 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
SMAD6O43541 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMAD6O43541 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SMAD6O43541 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms