Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPM1DO15297 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPM1DO15297 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPM1DO15297 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPM1DO15297 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PPM1DO15297 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PPM1DO15297 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPM1DO15297 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPM1DO15297 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPM1DO15297 MIR718-201ENST00000390190 70 ntBASIC19.5■□□□□ 0.71
PPM1DO15297 AC239809.2-201ENST00000415381 517 ntBASIC19.5■□□□□ 0.71
PPM1DO15297 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.5■□□□□ 0.71
PPM1DO15297 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPM1DO15297 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPM1DO15297 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.5■□□□□ 0.71
PPM1DO15297 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.5■□□□□ 0.71
PPM1DO15297 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.5■□□□□ 0.71
PPM1DO15297 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PPM1DO15297 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.5■□□□□ 0.71
PPM1DO15297 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPM1DO15297 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.5■□□□□ 0.71
PPM1DO15297 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PPM1DO15297 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.5■□□□□ 0.71
PPM1DO15297 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPM1DO15297 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 AC124283.5-201ENST00000624661 1809 ntBASIC19.49■□□□□ 0.71
PPM1DO15297 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.49■□□□□ 0.71
PPM1DO15297 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 KRASP1-201ENST00000407852 552 ntBASIC19.49■□□□□ 0.71
PPM1DO15297 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.49■□□□□ 0.71
PPM1DO15297 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.49■□□□□ 0.71
PPM1DO15297 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.49■□□□□ 0.71
PPM1DO15297 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPM1DO15297 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
PPM1DO15297 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.48■□□□□ 0.71
PPM1DO15297 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.48■□□□□ 0.71
PPM1DO15297 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.48■□□□□ 0.71
PPM1DO15297 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.48■□□□□ 0.71
PPM1DO15297 AC110285.5-201ENST00000611501 352 ntBASIC19.48■□□□□ 0.71
PPM1DO15297 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 AC092667.1-201ENST00000434301 2586 ntBASIC19.48■□□□□ 0.71
PPM1DO15297 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.48■□□□□ 0.71
PPM1DO15297 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPM1DO15297 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.47■□□□□ 0.71
PPM1DO15297 PTBP1P-201ENST00000554374 1601 ntBASIC19.47■□□□□ 0.71
PPM1DO15297 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PPM1DO15297 AC073314.1-201ENST00000568729 2216 ntBASIC19.47■□□□□ 0.71
PPM1DO15297 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.47■□□□□ 0.71
PPM1DO15297 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.47■□□□□ 0.71
PPM1DO15297 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPM1DO15297 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPM1DO15297 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.47■□□□□ 0.71
PPM1DO15297 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPM1DO15297 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.47■□□□□ 0.71
PPM1DO15297 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPM1DO15297 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPM1DO15297 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PPM1DO15297 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PPM1DO15297 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PPM1DO15297 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PPM1DO15297 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PPM1DO15297 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.46■□□□□ 0.71
PPM1DO15297 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.46■□□□□ 0.71
PPM1DO15297 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.46■□□□□ 0.71
PPM1DO15297 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PPM1DO15297 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPM1DO15297 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPM1DO15297 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PPM1DO15297 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
PPM1DO15297 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms