Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.12■□□□□ 0.65
RTCAO00442 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.12■□□□□ 0.65
RTCAO00442 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.12■□□□□ 0.65
RTCAO00442 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.12■□□□□ 0.65
RTCAO00442 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTCAO00442 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTCAO00442 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RTCAO00442 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTCAO00442 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.11■□□□□ 0.65
RTCAO00442 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTCAO00442 AFG3L1P-217ENST00000557444 2447 ntBASIC19.11■□□□□ 0.65
RTCAO00442 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
RTCAO00442 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.11■□□□□ 0.65
RTCAO00442 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RTCAO00442 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTCAO00442 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTCAO00442 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTCAO00442 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTCAO00442 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTCAO00442 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
RTCAO00442 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTCAO00442 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTCAO00442 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 TCF3P1-201ENST00000423021 1937 ntBASIC19.1■□□□□ 0.65
RTCAO00442 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.1■□□□□ 0.65
RTCAO00442 HLA-L-209ENST00000420110 1011 ntBASIC19.1■□□□□ 0.65
RTCAO00442 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.1■□□□□ 0.65
RTCAO00442 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RTCAO00442 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.1■□□□□ 0.65
RTCAO00442 AC092118.2-201ENST00000613495 667 ntBASIC19.1■□□□□ 0.65
RTCAO00442 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.1■□□□□ 0.65
RTCAO00442 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.1■□□□□ 0.65
RTCAO00442 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.1■□□□□ 0.65
RTCAO00442 BX119927.1-201ENST00000636596 1552 ntBASIC19.1■□□□□ 0.65
RTCAO00442 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTCAO00442 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RTCAO00442 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.09■□□□□ 0.65
RTCAO00442 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.09■□□□□ 0.65
RTCAO00442 AC091874.3-201ENST00000512672 1195 ntBASIC19.09■□□□□ 0.65
RTCAO00442 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.09■□□□□ 0.65
RTCAO00442 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.09■□□□□ 0.65
RTCAO00442 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RTCAO00442 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTCAO00442 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.09■□□□□ 0.65
RTCAO00442 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.09■□□□□ 0.65
RTCAO00442 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTCAO00442 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RTCAO00442 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.09■□□□□ 0.65
RTCAO00442 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTCAO00442 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
RTCAO00442 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTCAO00442 AL691432.2-201ENST00000607222 2038 ntBASIC19.08■□□□□ 0.65
RTCAO00442 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTCAO00442 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.08■□□□□ 0.65
RTCAO00442 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTCAO00442 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RTCAO00442 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTCAO00442 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTCAO00442 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RTCAO00442 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTCAO00442 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTCAO00442 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTCAO00442 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTCAO00442 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.08■□□□□ 0.64
RTCAO00442 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RTCAO00442 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.08■□□□□ 0.64
RTCAO00442 MIR4758-201ENST00000577688 71 ntBASIC19.08■□□□□ 0.64
RTCAO00442 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RTCAO00442 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms