Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR4O00206 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR4O00206 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TLR4O00206 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TLR4O00206 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TLR4O00206 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.88■□□□□ 0.77
TLR4O00206 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.88■□□□□ 0.77
TLR4O00206 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.88■□□□□ 0.77
TLR4O00206 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.88■□□□□ 0.77
TLR4O00206 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.88■□□□□ 0.77
TLR4O00206 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.88■□□□□ 0.77
TLR4O00206 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TLR4O00206 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.88■□□□□ 0.77
TLR4O00206 AC113410.3-201ENST00000623366 203 ntBASIC19.88■□□□□ 0.77
TLR4O00206 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TLR4O00206 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TLR4O00206 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TLR4O00206 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TLR4O00206 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TLR4O00206 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.87■□□□□ 0.77
TLR4O00206 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TLR4O00206 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.87■□□□□ 0.77
TLR4O00206 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TLR4O00206 LINC01023-201ENST00000606054 436 ntBASIC19.87■□□□□ 0.77
TLR4O00206 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.87■□□□□ 0.77
TLR4O00206 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TLR4O00206 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.86■□□□□ 0.77
TLR4O00206 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.86■□□□□ 0.77
TLR4O00206 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.86■□□□□ 0.77
TLR4O00206 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.86■□□□□ 0.77
TLR4O00206 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.86■□□□□ 0.77
TLR4O00206 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.86■□□□□ 0.77
TLR4O00206 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TLR4O00206 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.86■□□□□ 0.77
TLR4O00206 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.86■□□□□ 0.77
TLR4O00206 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.86■□□□□ 0.77
TLR4O00206 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.86■□□□□ 0.77
TLR4O00206 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TLR4O00206 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TLR4O00206 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.85■□□□□ 0.77
TLR4O00206 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TLR4O00206 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.85■□□□□ 0.77
TLR4O00206 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.85■□□□□ 0.77
TLR4O00206 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.85■□□□□ 0.77
TLR4O00206 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TLR4O00206 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.85■□□□□ 0.77
TLR4O00206 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.85■□□□□ 0.77
TLR4O00206 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.85■□□□□ 0.77
TLR4O00206 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TLR4O00206 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TLR4O00206 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
TLR4O00206 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.84■□□□□ 0.77
TLR4O00206 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.84■□□□□ 0.77
TLR4O00206 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TLR4O00206 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TLR4O00206 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.84■□□□□ 0.77
TLR4O00206 AC121338.2-201ENST00000622535 1744 ntBASIC19.84■□□□□ 0.77
TLR4O00206 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 AC005229.4-201ENST00000610085 2198 ntBASIC19.84■□□□□ 0.77
TLR4O00206 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TLR4O00206 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TLR4O00206 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms