Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 AC099778.1-201ENST00000568593 1911 ntBASIC19.99■□□□□ 0.79
CCDC189A1A4V9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC189A1A4V9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 ZNRF2P3-201ENST00000424200 374 ntBASIC19.98■□□□□ 0.79
CCDC189A1A4V9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC189A1A4V9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 MYCNOS-205ENST00000641950 531 ntBASIC19.97■□□□□ 0.79
CCDC189A1A4V9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC189A1A4V9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC189A1A4V9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 AC106820.2-201ENST00000563775 3264 ntBASIC19.95■□□□□ 0.78
CCDC189A1A4V9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 KRT18P11-201ENST00000435214 1283 ntBASIC19.95■□□□□ 0.78
CCDC189A1A4V9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms