Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
LINC00959A0A1B0GUT2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 AC116562.4-201ENST00000641316 2276 ntBASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00959A0A1B0GUT2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 TERF1P5-201ENST00000477545 1207 ntBASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00959A0A1B0GUT2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 ZNRF2P3-201ENST00000424200 374 ntBASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 AC010536.3-201ENST00000620306 533 ntBASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms