Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 MCRIP2P1-201ENST00000394346 511 ntBASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 RARRES2P4-201ENST00000514074 484 ntBASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 KRT8P36-201ENST00000489121 1440 ntBASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 AC068338.2-201ENST00000563278 1430 ntBASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 AC087633.2-202ENST00000565166 1439 ntBASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 AC004911.1-201ENST00000416316 871 ntBASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 CYP2T1P-201ENST00000432607 1285 ntBASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 CNN2P6-201ENST00000439038 900 ntBASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRGV4A0A0C4DH28 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV4A0A0C4DH28 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV4A0A0C4DH28 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV4A0A0C4DH28 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV4A0A0C4DH28 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV4A0A0C4DH28 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRGV4A0A0C4DH28 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV4A0A0C4DH28 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV4A0A0C4DH28 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms