Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 WWOX-216ENST00000569818 525 ntBASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 AC006011.2-201ENST00000621313 1158 ntBASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.64■■□□□ 1.7
LOC102724428A0A0B4J2F2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.64■■□□□ 1.7
LOC102724428A0A0B4J2F2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.64■■□□□ 1.7
LOC102724428A0A0B4J2F2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.64■■□□□ 1.7
LOC102724428A0A0B4J2F2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
LOC102724428A0A0B4J2F2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LOC102724428A0A0B4J2F2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.64■■□□□ 1.69
LOC102724428A0A0B4J2F2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.69
LOC102724428A0A0B4J2F2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 C1QL1P1-201ENST00000568105 661 ntBASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 AC087388.1-201ENST00000571370 1112 ntBASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 FSCN1P1-201ENST00000568912 1481 ntBASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
LOC102724428A0A0B4J2F2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LOC102724428A0A0B4J2F2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 AC121338.2-201ENST00000622535 1744 ntBASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 AC026271.3-201ENST00000571884 352 ntBASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 AP005242.2-201ENST00000580065 1175 ntBASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 AL445675.2-201ENST00000620291 557 ntBASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.61■■□□□ 1.69
LOC102724428A0A0B4J2F2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 Z98882.1-201ENST00000622160 2253 ntBASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 C2orf69P3-201ENST00000565542 1120 ntBASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 GRAMD4P8-201ENST00000605465 1115 ntBASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.6■■□□□ 1.69
LOC102724428A0A0B4J2F2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
LOC102724428A0A0B4J2F2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LOC102724428A0A0B4J2F2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
LOC102724428A0A0B4J2F2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.59■■□□□ 1.69
LOC102724428A0A0B4J2F2 ECEL1P2-202ENST00000465689 757 ntBASIC25.59■■□□□ 1.69
LOC102724428A0A0B4J2F2 EGLN1P1-201ENST00000531623 762 ntBASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms