Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AC026367.2-201ENST00000610630 553 ntBASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AL139123.1-201ENST00000612008 430 ntBASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AL121985.3-201ENST00000620690 523 ntBASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AC106795.5-201ENST00000623288 454 ntBASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AL163152.1-201ENST00000642001 374 ntBASIC10.38□□□□□ -0.75
TMC1Q8TDI8 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TMC1Q8TDI8 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 RNA5SP442-201ENST00000365050 107 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AL117344.1-201ENST00000407196 616 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 FTH1P5-201ENST00000425761 545 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AC087499.3-202ENST00000441215 1173 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 NUCKS1P1-201ENST00000452067 703 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 EIF2S2P5-201ENST00000457635 968 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AC008040.4-201ENST00000494834 768 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 ZNF969P-201ENST00000510345 2341 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AK6-204ENST00000512561 587 ntTSL 5 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 MIR744-201ENST00000578242 98 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 MIR1273F-201ENST00000580581 99 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AC243960.7-201ENST00000623532 707 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TMC1Q8TDI8 AL353795.1-201ENST00000439134 1775 ntBASIC10.37□□□□□ -0.75
TMC1Q8TDI8 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC069222.1-201ENST00000608028 3360 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 MIR498-201ENST00000385134 124 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 RNU6-1176P-201ENST00000390955 107 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AL355375.1-201ENST00000405686 392 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 FTOP1-201ENST00000419363 861 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 FECHP1-201ENST00000431896 1214 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 VN1R48P-201ENST00000448149 1036 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC008799.2-201ENST00000484429 647 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 RPL37AP8-201ENST00000494116 276 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC073648.3-201ENST00000504939 925 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 CARD8-214ENST00000520007 614 ntTSL 2 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AL136139.1-201ENST00000605568 222 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 AC023510.2-201ENST00000622162 746 ntBASIC10.36□□□□□ -0.75
TMC1Q8TDI8 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC10.36□□□□□ -0.75
TMC1Q8TDI8 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC10.35□□□□□ -0.75
TMC1Q8TDI8 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC10.35□□□□□ -0.75
TMC1Q8TDI8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMC1Q8TDI8 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
TMC1Q8TDI8 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMC1Q8TDI8 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms