Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC008993.2-201ENST00000631744 806 ntBASIC9.08□□□□□ -0.96
ERCC3P19447 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
ERCC3P19447 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ERCC3P19447 AC074198.1-201ENST00000506546 1397 ntBASIC9.08□□□□□ -0.96
ERCC3P19447 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
ERCC3P19447 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ERCC3P19447 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC9.08□□□□□ -0.96
ERCC3P19447 MAPK10-354ENST00000641823 2732 ntBASIC9.08□□□□□ -0.96
ERCC3P19447 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
ERCC3P19447 AC022150.4-201ENST00000598322 2848 ntBASIC9.08□□□□□ -0.96
ERCC3P19447 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ERCC3P19447 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ERCC3P19447 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC9.08□□□□□ -0.96
ERCC3P19447 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
ERCC3P19447 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC9.07□□□□□ -0.96
ERCC3P19447 CYP2AC1P-201ENST00000407830 1173 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 SNX18P13-201ENST00000412442 529 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 MTCO2P17-201ENST00000424336 677 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 MTCO1P45-201ENST00000431457 267 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 ZNF965P-201ENST00000432501 817 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC9.07□□□□□ -0.96
ERCC3P19447 RN7SL335P-201ENST00000482790 304 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 OR51A1P-201ENST00000511110 946 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
ERCC3P19447 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC9.07□□□□□ -0.96
ERCC3P19447 HNRNPCP8-201ENST00000528764 888 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 OR4A1P-201ENST00000532342 920 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 AC103855.4-201ENST00000533158 265 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC9.07□□□□□ -0.96
ERCC3P19447 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC9.07□□□□□ -0.96
ERCC3P19447 OR4N1P-201ENST00000554847 949 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC9.07□□□□□ -0.96
ERCC3P19447 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC9.07□□□□□ -0.96
ERCC3P19447 CLIC4P2-201ENST00000601934 717 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 OR51C1P-201ENST00000608504 942 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC9.07□□□□□ -0.96
ERCC3P19447 OR4G3P-201ENST00000633500 913 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC9.07□□□□□ -0.96
ERCC3P19447 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
ERCC3P19447 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
ERCC3P19447 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
ERCC3P19447 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC9.07□□□□□ -0.96
ERCC3P19447 TOPORSLP1-201ENST00000467693 2102 ntBASIC9.07□□□□□ -0.96
ERCC3P19447 GPI-202ENST00000415930 4000 ntTSL 2 BASIC9.07□□□□□ -0.96
ERCC3P19447 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
ERCC3P19447 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 OR8G3P-203ENST00000641848 1344 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC9.06□□□□□ -0.96
ERCC3P19447 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC9.06□□□□□ -0.96
ERCC3P19447 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC9.06□□□□□ -0.96
ERCC3P19447 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
ERCC3P19447 RNU6-1000P-201ENST00000391066 106 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AC092952.1-201ENST00000397646 1209 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 KRT18P52-201ENST00000404956 846 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 RN7SKP236-201ENST00000410635 284 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC9.06□□□□□ -0.96
ERCC3P19447 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
ERCC3P19447 AC092106.1-201ENST00000444291 373 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 RPS3AP53-201ENST00000454716 778 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AL357037.1-201ENST00000454758 322 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 RPL12P21-201ENST00000472214 518 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 RPL5P15-201ENST00000475870 897 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 RN7SL549P-201ENST00000478997 282 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 HNRNPA1P44-201ENST00000503999 879 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC9.06□□□□□ -0.96
ERCC3P19447 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.06□□□□□ -0.96
ERCC3P19447 AC134698.1-201ENST00000511619 643 ntBASIC9.06□□□□□ -0.96
ERCC3P19447 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms