Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.52□□□□□ -1.21
ERCC2P18074 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC2P18074 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC2P18074 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.52□□□□□ -1.21
ERCC2P18074 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
ERCC2P18074 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC2P18074 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC2P18074 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC2P18074 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC2P18074 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
ERCC2P18074 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.52□□□□□ -1.21
ERCC2P18074 CASC19-205ENST00000641013 1411 ntBASIC7.52□□□□□ -1.21
ERCC2P18074 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.52□□□□□ -1.21
ERCC2P18074 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC2P18074 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
ERCC2P18074 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.51□□□□□ -1.21
ERCC2P18074 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 AC009166.2-201ENST00000624410 2833 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
ERCC2P18074 NHP2P2-201ENST00000396362 460 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 RNU2-5P-201ENST00000410533 180 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC2P18074 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC2P18074 RBMY2JP-201ENST00000425544 1059 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 FDPSP8-201ENST00000438304 1089 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 AC079781.1-201ENST00000441505 394 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 PMS2P11-201ENST00000451831 574 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC2P18074 AC066616.1-201ENST00000486795 413 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 FRG2IP-201ENST00000563581 781 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.51□□□□□ -1.21
ERCC2P18074 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC2P18074 AC015801.1-201ENST00000585651 153 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC2P18074 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.51□□□□□ -1.21
ERCC2P18074 AC080112.3-201ENST00000612552 880 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 AL121809.2-201ENST00000613169 341 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC2P18074 AC068234.2-201ENST00000619646 522 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 AC241377.2-202ENST00000636462 997 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 AL157713.1-201ENST00000379752 1531 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 AL035563.1-201ENST00000609087 1539 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC2P18074 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 AP002364.1-201ENST00000623330 3386 ntBASIC7.51□□□□□ -1.21
ERCC2P18074 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.51□□□□□ -1.21
ERCC2P18074 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC2P18074 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.51□□□□□ -1.21
ERCC2P18074 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
ERCC2P18074 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
ERCC2P18074 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
ERCC2P18074 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC2P18074 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC2P18074 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
ERCC2P18074 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ERCC2P18074 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ERCC2P18074 RN7SKP1-201ENST00000365525 307 ntBASIC7.5□□□□□ -1.21
ERCC2P18074 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ERCC2P18074 SLC25A5P7-201ENST00000406156 896 ntBASIC7.5□□□□□ -1.21
ERCC2P18074 AL627308.2-201ENST00000420014 432 ntBASIC7.5□□□□□ -1.21
ERCC2P18074 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC7.5□□□□□ -1.21
ERCC2P18074 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC2P18074 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 SSX8-201ENST00000506270 579 ntBASIC7.5□□□□□ -1.21
ERCC2P18074 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.5□□□□□ -1.21
ERCC2P18074 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC2P18074 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC2P18074 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC2P18074 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC2P18074 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms