Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN2BO60939 AC112225.1-201ENST00000508230 297 ntBASIC6.93□□□□□ -1.3
SCN2BO60939 AC023794.3-204ENST00000510754 236 ntBASIC6.93□□□□□ -1.3
SCN2BO60939 AC120036.3-201ENST00000517826 292 ntBASIC6.93□□□□□ -1.3
SCN2BO60939 OR4A1P-201ENST00000532342 920 ntBASIC6.93□□□□□ -1.3
SCN2BO60939 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 NUTF2P2-201ENST00000551207 384 ntBASIC6.93□□□□□ -1.3
SCN2BO60939 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN2BO60939 AC092133.1-201ENST00000565828 719 ntBASIC6.93□□□□□ -1.3
SCN2BO60939 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN2BO60939 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN2BO60939 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN2BO60939 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN2BO60939 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 FAM74A6-203ENST00000615956 481 ntBASIC6.93□□□□□ -1.3
SCN2BO60939 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN2BO60939 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN2BO60939 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
SCN2BO60939 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.93□□□□□ -1.3
SCN2BO60939 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SCN2BO60939 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
SCN2BO60939 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCN2BO60939 TRIM60P14-201ENST00000513444 1419 ntBASIC6.93□□□□□ -1.3
SCN2BO60939 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SCN2BO60939 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 AC009237.3-203ENST00000442128 3551 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.92□□□□□ -1.3
SCN2BO60939 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.92□□□□□ -1.3
SCN2BO60939 RNA5SP448-201ENST00000363151 111 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 RNA5SP483-201ENST00000363431 118 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC6.92□□□□□ -1.3
SCN2BO60939 MSRB1P1-201ENST00000396851 354 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 SNORA3.1-201ENST00000408166 111 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC020983.1-201ENST00000417063 543 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.92□□□□□ -1.3
SCN2BO60939 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC104698.1-201ENST00000435671 276 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 AC002553.1-201ENST00000442828 802 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC6.92□□□□□ -1.3
SCN2BO60939 RN7SL325P-201ENST00000460434 283 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 RN7SL223P-201ENST00000470401 294 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.92□□□□□ -1.3
SCN2BO60939 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.92□□□□□ -1.3
SCN2BO60939 AP003385.2-201ENST00000524910 973 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 AP002383.5-201ENST00000542623 1161 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC092368.2-201ENST00000565911 600 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.92□□□□□ -1.3
SCN2BO60939 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC138904.2-201ENST00000614412 107 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 AL450226.2-201ENST00000622913 439 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 MRPS17P1-201ENST00000596009 3130 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN2BO60939 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 AC138915.4-201ENST00000565549 4147 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 SPATA31C2-201ENST00000324915 3777 ntBASIC6.92□□□□□ -1.3
SCN2BO60939 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SCN2BO60939 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN2BO60939 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms