Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC004014.2-201ENST00000623718 5122 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC090132.1-201ENST00000524071 1480 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 FUNDC2P2-202ENST00000443452 493 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC016559.1-201ENST00000511420 199 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 HNRNPCP8-201ENST00000528764 888 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC233699.1-201ENST00000569955 1168 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC097376.1-201ENST00000602907 997 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC025162.2-201ENST00000619602 560 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 FGL2-202ENST00000637771 989 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 OR6C71P-202ENST00000641886 1107 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 AC138627.1-203ENST00000641872 1680 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 SF3A3P1-201ENST00000446317 1477 ntBASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP1Q96SZ6 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC145138.1-201ENST00000512908 2851 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 HYDIN2-203ENST00000614586 13885 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 RBMX2P2-201ENST00000257020 946 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AL078621.1-201ENST00000272567 768 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 MIR575-201ENST00000385013 94 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 SNX18P13-201ENST00000412442 529 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 PPIL1P1-201ENST00000423936 499 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AL929410.2-201ENST00000451170 189 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 TAAR4P-201ENST00000454843 1039 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms