Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
NEK3P51956 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
NEK3P51956 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
NEK3P51956 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NEK3P51956 AC104162.1-201ENST00000430831 2382 ntBASIC7.77□□□□□ -1.17
NEK3P51956 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.77□□□□□ -1.17
NEK3P51956 MFSD8-227ENST00000641393 4069 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AC027313.1-201ENST00000509159 1666 ntBASIC7.77□□□□□ -1.17
NEK3P51956 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.77□□□□□ -1.17
NEK3P51956 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NEK3P51956 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 RPL5P5-201ENST00000392009 893 ntBASIC7.77□□□□□ -1.17
NEK3P51956 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 HMGB3P1-201ENST00000393368 573 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AC226101.1-201ENST00000401483 387 ntBASIC7.77□□□□□ -1.17
NEK3P51956 NPM1P36-201ENST00000415681 835 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AC013268.2-201ENST00000420753 337 ntBASIC7.77□□□□□ -1.17
NEK3P51956 RPL5P34-201ENST00000426545 891 ntBASIC7.77□□□□□ -1.17
NEK3P51956 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.77□□□□□ -1.17
NEK3P51956 DDX11L10-201ENST00000430178 571 ntBASIC7.77□□□□□ -1.17
NEK3P51956 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NEK3P51956 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AC108039.2-201ENST00000440214 359 ntBASIC7.77□□□□□ -1.17
NEK3P51956 RPL5P9-201ENST00000448118 886 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AL583856.1-201ENST00000454078 1101 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AC106774.2-201ENST00000510266 406 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AC113352.1-201ENST00000513196 666 ntBASIC7.77□□□□□ -1.17
NEK3P51956 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 MTND6P19-201ENST00000519399 524 ntBASIC7.77□□□□□ -1.17
NEK3P51956 BTF3P1-201ENST00000522014 495 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.77□□□□□ -1.17
NEK3P51956 AP001636.1-201ENST00000531997 1122 ntBASIC7.77□□□□□ -1.17
NEK3P51956 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 AC025423.2-201ENST00000537570 439 ntBASIC7.77□□□□□ -1.17
NEK3P51956 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
NEK3P51956 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.77□□□□□ -1.17
NEK3P51956 AP000919.1-201ENST00000582850 985 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.77□□□□□ -1.17
NEK3P51956 PRR13P3-201ENST00000603578 376 ntBASIC7.77□□□□□ -1.17
NEK3P51956 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.77□□□□□ -1.17
NEK3P51956 AC016911.1-201ENST00000613297 452 ntBASIC7.77□□□□□ -1.17
NEK3P51956 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.77□□□□□ -1.17
NEK3P51956 AC073488.2-201ENST00000631903 751 ntBASIC7.77□□□□□ -1.17
NEK3P51956 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NEK3P51956 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.77□□□□□ -1.17
NEK3P51956 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.77□□□□□ -1.17
NEK3P51956 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.77□□□□□ -1.17
NEK3P51956 THAP12P3-201ENST00000456373 2266 ntBASIC7.77□□□□□ -1.17
NEK3P51956 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
NEK3P51956 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
NEK3P51956 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
NEK3P51956 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.76□□□□□ -1.17
NEK3P51956 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.76□□□□□ -1.17
NEK3P51956 CDY10P-201ENST00000452415 1567 ntBASIC7.76□□□□□ -1.17
NEK3P51956 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
NEK3P51956 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 RNA5SP79-201ENST00000365193 109 ntBASIC7.76□□□□□ -1.17
NEK3P51956 RNU1-16P-201ENST00000365477 164 ntBASIC7.76□□□□□ -1.17
NEK3P51956 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 RN7SKP207-201ENST00000411204 303 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.76□□□□□ -1.17
NEK3P51956 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 AL022100.1-202ENST00000421214 548 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC009299.1-201ENST00000429684 717 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC099344.1-201ENST00000433548 492 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.76□□□□□ -1.17
NEK3P51956 RN7SL55P-201ENST00000464534 297 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC022730.2-201ENST00000465359 452 ntBASIC7.76□□□□□ -1.17
NEK3P51956 RN7SL861P-201ENST00000473793 285 ntBASIC7.76□□□□□ -1.17
NEK3P51956 DEFB109A-201ENST00000482450 265 ntBASIC7.76□□□□□ -1.17
NEK3P51956 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.76□□□□□ -1.17
NEK3P51956 RN7SL635P-201ENST00000492123 296 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC084871.2-201ENST00000503355 464 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms