Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HMG20BQ9P0W2 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HMG20BQ9P0W2 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HMG20BQ9P0W2 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.93□□□□□ -0.98
HMG20BQ9P0W2 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
HMG20BQ9P0W2 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.93□□□□□ -0.98
HMG20BQ9P0W2 COL6A4P1-202ENST00000487147 4317 ntBASIC8.93□□□□□ -0.98
HMG20BQ9P0W2 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HMG20BQ9P0W2 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC018688.1-201ENST00000636528 1754 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 NPM1P14-201ENST00000343743 866 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 PPIAP22-201ENST00000358455 498 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AL593856.1-201ENST00000419949 805 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC114928.1-201ENST00000446516 415 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC093799.1-201ENST00000452411 499 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 GLRXP3-201ENST00000470810 321 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC079594.1-201ENST00000489757 331 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 RN7SL569P-201ENST00000494652 288 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 OR5F2P-201ENST00000532761 941 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 SLC25A51P2-201ENST00000535708 889 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AL512430.4-201ENST00000603085 613 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AL121985.3-201ENST00000620690 523 ntBASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
HMG20BQ9P0W2 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AF131215.2-201ENST00000531549 1710 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 SAMMSON-222ENST00000641901 2727 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AC131649.2-201ENST00000624925 4439 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 MIR27A-201ENST00000385073 78 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 RNA5SP35-201ENST00000391257 129 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AL117344.1-201ENST00000407196 616 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AL157698.1-201ENST00000415190 1011 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AL161742.1-201ENST00000418154 584 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 EEF1GP7-201ENST00000422983 703 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 RN7SL251P-201ENST00000464175 297 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AC013283.1-201ENST00000557282 492 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AL590396.3-201ENST00000636334 300 ntBASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HMG20BQ9P0W2 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 HYDIN2-203ENST00000614586 13885 ntBASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 RNA5SP442-201ENST00000365050 107 ntBASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 SNORA70.8-201ENST00000384231 136 ntBASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 ANXA2P2-201ENST00000435128 1020 ntBASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 AL161626.1-201ENST00000441480 490 ntBASIC8.9□□□□□ -0.98
HMG20BQ9P0W2 CYCSP44-201ENST00000448560 313 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms