Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.84□□□□□ -1.16
CDK5RAP1Q96SZ6 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
CDK5RAP1Q96SZ6 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC009948.5-201ENST00000624360 4406 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC016930.1-201ENST00000468766 2205 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 RN7SKP63-201ENST00000363187 301 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 RNU1-122P-201ENST00000365538 156 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 NXT2-204ENST00000372107 937 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AL139806.1-201ENST00000403057 1002 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 RN7SKP131-201ENST00000410698 301 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC233724.10-201ENST00000510454 409 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 MIR4685-201ENST00000578185 69 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC115989.2-201ENST00000578640 563 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AL390058.1-201ENST00000603834 629 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC016542.1-201ENST00000608259 493 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AL118508.4-201ENST00000624142 1176 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AC009039.2-201ENST00000624524 529 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 SNORA43.5-201ENST00000631270 138 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 AL353795.1-201ENST00000439134 1775 ntBASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CDK5RAP1Q96SZ6 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 SOCS5P5-201ENST00000402732 1586 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL078595.1-201ENST00000404458 226 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 RN7SKP236-201ENST00000410635 284 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL590240.2-201ENST00000413370 894 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC231533.2-201ENST00000419045 978 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL022100.1-202ENST00000421214 548 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 GRPEL2P2-201ENST00000421856 670 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC092421.1-201ENST00000448148 418 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 CDC42P2-201ENST00000448566 569 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 PTMAP1-205ENST00000455552 325 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC090539.2-201ENST00000523425 671 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL356800.1-201ENST00000553339 735 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 RN7SL835P-201ENST00000579920 262 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 U47924.1-201ENST00000606539 434 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 MIR7162-201ENST00000611134 69 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 MIR6731-201ENST00000614863 72 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AC253576.2-201ENST00000618815 580 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL355974.1-201ENST00000618896 1708 ntBASIC7.82□□□□□ -1.16
CDK5RAP1Q96SZ6 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms