Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CDYLP1-201ENST00000419017 1458 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 LINC02128-205ENST00000641755 1334 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 RNA5SP483-201ENST00000363431 118 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MIR181C-201ENST00000384881 110 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MIR106B-201ENST00000385301 82 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 RNA5SP18-201ENST00000390935 121 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 HNRNPCP2-201ENST00000399515 881 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 COX6A1P3-201ENST00000404167 293 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 VDAC1P8-201ENST00000406025 853 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC003071.2-201ENST00000423857 315 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC023141.6-201ENST00000429418 337 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MTATP6P26-201ENST00000445926 662 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC007000.1-201ENST00000453064 794 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MTCYBP14-201ENST00000457471 715 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AL139824.2-201ENST00000458731 1095 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 RN7SL414P-201ENST00000469545 294 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 RN7SL445P-201ENST00000495609 293 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 TRAV31-201ENST00000502780 342 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC117525.1-201ENST00000515228 503 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 MTND2P38-201ENST00000522536 667 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 OR4A7P-201ENST00000531463 910 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 RPL41P2-201ENST00000544920 409 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC027216.1-201ENST00000577726 685 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 RN7SL786P-201ENST00000579130 298 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC015911.5-201ENST00000587076 451 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC006116.7-201ENST00000590141 756 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC133794.1-201ENST00000602731 914 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AP006248.3-201ENST00000623580 594 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC068057.2-201ENST00000624047 895 ntBASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
TRIM48Q8IWZ4 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC090774.4-201ENST00000578888 1372 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 RNA5SP427-201ENST00000365323 119 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 H2AFZP3-201ENST00000394213 387 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AL035405.1-201ENST00000400795 710 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 RNU6-584P-201ENST00000410350 95 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 IFNA12P-201ENST00000413147 571 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 USP12PY-201ENST00000427677 1064 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 SUMO2P10-201ENST00000452006 288 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms