Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 CHCHD3P2-201ENST00000550751 639 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC084033.1-201ENST00000550830 633 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC107993.1-201ENST00000591343 684 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC010615.3-201ENST00000597319 394 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC018688.1-201ENST00000636528 1754 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC138915.4-201ENST00000565549 4147 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CREM-218ENST00000460270 1416 ntTSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 SLC9B1P3-201ENST00000452667 1334 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 RNU1-16P-201ENST00000365477 164 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AMELY-202ENST00000383036 621 ntTSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 NUS1P4-201ENST00000401550 585 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 LARP1P1-201ENST00000407692 292 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 OR8B9P-201ENST00000419756 925 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 RPL4P4-201ENST00000422486 1284 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 DDX11L10-201ENST00000430178 571 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 FO393419.1-201ENST00000443746 355 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 GLRXP3-201ENST00000470810 321 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 NPY6R-201ENST00000503807 1112 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AP000619.1-201ENST00000540293 1000 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 NUTF2P2-201ENST00000551207 384 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 RN7SL178P-201ENST00000582930 304 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 RPL35AP25-201ENST00000584631 330 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AL137190.1-201ENST00000603288 282 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AC129492.5-201ENST00000603489 315 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AC004852.1-201ENST00000605206 154 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AL391903.2-201ENST00000614532 247 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AL353608.4-201ENST00000624487 1188 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AL096816.1-201ENST00000623300 2920 ntBASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
LINC00346Q8IVM7 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms