Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC211486.4-201ENST00000621495 113 ntBASIC9.26□□□□□ -0.93
COL15A1P39059 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
COL15A1P39059 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC9.26□□□□□ -0.93
COL15A1P39059 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
COL15A1P39059 AC105046.1-201ENST00000566457 4997 ntBASIC9.26□□□□□ -0.93
COL15A1P39059 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
COL15A1P39059 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
COL15A1P39059 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC9.26□□□□□ -0.93
COL15A1P39059 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC9.26□□□□□ -0.93
COL15A1P39059 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
COL15A1P39059 AC090643.1-201ENST00000623600 3100 ntBASIC9.26□□□□□ -0.93
COL15A1P39059 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
COL15A1P39059 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC9.26□□□□□ -0.93
COL15A1P39059 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC9.26□□□□□ -0.93
COL15A1P39059 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC9.26□□□□□ -0.93
COL15A1P39059 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 AC234771.4-201ENST00000441416 730 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC9.25□□□□□ -0.93
COL15A1P39059 RN7SL751P-201ENST00000473281 284 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 OXR1-212ENST00000521592 993 ntTSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 AC069240.2-201ENST00000550242 609 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 RN7SL66P-201ENST00000582099 264 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 AC097376.1-201ENST00000602907 997 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 AC087894.3-201ENST00000623682 349 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 AC099667.1-201ENST00000624222 469 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 TRIM64EP-201ENST00000531233 1307 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
COL15A1P39059 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 SALL1P1-201ENST00000438101 3837 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 EML5-201ENST00000380664 5910 ntTSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
COL15A1P39059 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
COL15A1P39059 AL512662.1-201ENST00000624850 2251 ntBASIC9.25□□□□□ -0.93
COL15A1P39059 LDHAP5-201ENST00000394996 622 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 AL355375.1-201ENST00000405686 392 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 RNA5SP280-201ENST00000411230 115 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 AL590240.2-201ENST00000413370 894 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 AC123904.1-201ENST00000441072 368 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 RPL12P49-201ENST00000441100 121 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 BCAS2P1-201ENST00000528022 632 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC9.24□□□□□ -0.93
COL15A1P39059 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC9.24□□□□□ -0.93
COL15A1P39059 RBM4-213ENST00000578778 582 ntTSL 4 BASIC9.24□□□□□ -0.93
COL15A1P39059 MIR4312-201ENST00000579909 76 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 AL161420.1-201ENST00000619393 264 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 AC127502.2-201ENST00000602663 2351 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 AL353622.1-201ENST00000604716 1945 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
COL15A1P39059 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 WNK1-220ENST00000574564 1401 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC9.24□□□□□ -0.93
COL15A1P39059 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
COL15A1P39059 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 SNORA68-201ENST00000384437 133 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 RN7SKP146-201ENST00000410242 334 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 RN7SKP85-201ENST00000411349 318 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 AL593856.1-201ENST00000419949 805 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 CLNS1AP1-201ENST00000435954 682 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC9.24□□□□□ -0.93
COL15A1P39059 AC083855.1-201ENST00000440041 258 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 NPM1P9-201ENST00000453156 844 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 AC044810.1-201ENST00000480271 711 ntBASIC9.24□□□□□ -0.93
COL15A1P39059 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC9.24□□□□□ -0.93
COL15A1P39059 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC9.24□□□□□ -0.93
COL15A1P39059 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
COL15A1P39059 ASB8-207ENST00000536953 923 ntTSL 2 BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms