Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LRCH3Q96II8 NFU1P2-201ENST00000448700 469 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LRCH3Q96II8 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 RPL10P6-201ENST00000457497 318 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 RN7SL749P-201ENST00000460421 290 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 RN7SL815P-201ENST00000470970 290 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 IAH1-205ENST00000482918 863 ntTSL 3 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC006499.4-201ENST00000510947 694 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 TBCA-203ENST00000517679 545 ntTSL 3 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 IGLVI-68-201ENST00000519525 345 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC010198.2-201ENST00000550612 259 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 APEX1-214ENST00000557054 888 ntTSL 5 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC104229.1-201ENST00000561364 255 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC012182.1-201ENST00000570133 895 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 MIR4685-201ENST00000578185 69 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 MIR3689F-201ENST00000579617 66 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 AC083899.3-201ENST00000603413 594 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 AL049840.6-201ENST00000604583 345 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 AL157359.3-201ENST00000623771 217 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 AL357140.4-201ENST00000636827 412 ntBASIC9.65□□□□□ -0.86
LRCH3Q96II8 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LRCH3Q96II8 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LRCH3Q96II8 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LRCH3Q96II8 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 LRRC4C-201ENST00000278198 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LRCH3Q96II8 TRAF1-202ENST00000540010 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LRCH3Q96II8 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LRCH3Q96II8 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC9.65□□□□□ -0.86
LRCH3Q96II8 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.87
LRCH3Q96II8 AC004801.7-201ENST00000624535 2973 ntBASIC9.65□□□□□ -0.87
LRCH3Q96II8 ZNF615-202ENST00000391795 2698 ntTSL 2 BASIC9.65□□□□□ -0.87
LRCH3Q96II8 RTTN-202ENST00000578780 2333 ntTSL 5 BASIC9.65□□□□□ -0.87
LRCH3Q96II8 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LRCH3Q96II8 AP005230.1-205ENST00000639316 2015 ntTSL 5 BASIC9.65□□□□□ -0.87
LRCH3Q96II8 HENMT1-201ENST00000370031 1717 ntTSL 5 BASIC9.65□□□□□ -0.87
LRCH3Q96II8 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC9.65□□□□□ -0.87
LRCH3Q96II8 COA7-201ENST00000371538 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LRCH3Q96II8 AL133492.1-201ENST00000617854 3955 ntBASIC9.65□□□□□ -0.87
LRCH3Q96II8 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 EEF1A1P13-201ENST00000503537 1389 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 ACSBG2-206ENST00000588485 2478 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 BRAFP1-201ENST00000445336 2703 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 LINC01910-201ENST00000582251 2637 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 SS18-205ENST00000542420 2321 ntTSL 2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 ASB15-202ENST00000434204 2817 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 Y_RNA.62-201ENST00000362840 99 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 RNU6-1042P-201ENST00000384204 107 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC019178.1-201ENST00000392337 440 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AL590004.1-201ENST00000405321 300 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 PPIAP25-201ENST00000420177 540 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 RPL12P43-201ENST00000420608 499 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 RPL22P17-201ENST00000438729 315 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 PTGES3P1-201ENST00000439531 483 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 GAPDHP52-201ENST00000449535 942 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AURKAPS1-201ENST00000451805 1212 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 NIPA2P5-201ENST00000452282 464 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 RPL5P17-201ENST00000469685 877 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC108114.1-201ENST00000477321 437 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 PRR13P2-201ENST00000533804 406 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC134684.1-201ENST00000533883 264 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC006065.2-201ENST00000536978 211 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 RPL41P2-201ENST00000544920 409 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 NOP56P3-201ENST00000549457 385 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 OR4N3P-201ENST00000559395 818 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC036108.1-201ENST00000559468 588 ntTSL 4 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC012414.6-201ENST00000568241 401 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 TEX41-218ENST00000596540 882 ntTSL 5 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms