Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.82□□□□□ -1.16
APOEP02649 PRR13P3-201ENST00000603578 376 ntBASIC7.82□□□□□ -1.16
APOEP02649 MIR6736-201ENST00000616799 59 ntBASIC7.82□□□□□ -1.16
APOEP02649 PART1_3.1-201ENST00000619680 131 ntBASIC7.82□□□□□ -1.16
APOEP02649 AC099667.1-201ENST00000624222 469 ntBASIC7.82□□□□□ -1.16
APOEP02649 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.82□□□□□ -1.16
APOEP02649 OR5AU1-204ENST00000641822 1197 ntBASIC7.82□□□□□ -1.16
APOEP02649 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.82□□□□□ -1.16
APOEP02649 DDX50P1-201ENST00000438163 2400 ntBASIC7.82□□□□□ -1.16
APOEP02649 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.82□□□□□ -1.16
APOEP02649 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
APOEP02649 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
APOEP02649 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
APOEP02649 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.81□□□□□ -1.16
APOEP02649 AC090132.1-201ENST00000524071 1480 ntBASIC7.81□□□□□ -1.16
APOEP02649 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.81□□□□□ -1.16
APOEP02649 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.81□□□□□ -1.16
APOEP02649 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.81□□□□□ -1.16
APOEP02649 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.81□□□□□ -1.16
APOEP02649 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
APOEP02649 RNU1-122P-201ENST00000365538 156 ntBASIC7.81□□□□□ -1.16
APOEP02649 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC7.81□□□□□ -1.16
APOEP02649 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.81□□□□□ -1.16
APOEP02649 NFU1P1-201ENST00000413128 774 ntBASIC7.81□□□□□ -1.16
APOEP02649 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.81□□□□□ -1.16
APOEP02649 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.81□□□□□ -1.16
APOEP02649 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC7.81□□□□□ -1.16
APOEP02649 AL022100.1-202ENST00000421214 548 ntBASIC7.81□□□□□ -1.16
APOEP02649 AC093107.1-201ENST00000422772 609 ntBASIC7.81□□□□□ -1.16
APOEP02649 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 RPL5P6-201ENST00000425640 886 ntBASIC7.81□□□□□ -1.16
APOEP02649 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.81□□□□□ -1.16
APOEP02649 AL591379.2-201ENST00000450223 397 ntBASIC7.81□□□□□ -1.16
APOEP02649 AC013429.1-201ENST00000456604 422 ntBASIC7.81□□□□□ -1.16
APOEP02649 NPY6R-201ENST00000503807 1112 ntBASIC7.81□□□□□ -1.16
APOEP02649 AC022296.2-201ENST00000512424 202 ntBASIC7.81□□□□□ -1.16
APOEP02649 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.81□□□□□ -1.16
APOEP02649 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.81□□□□□ -1.16
APOEP02649 AC044860.3-201ENST00000559957 368 ntBASIC7.81□□□□□ -1.16
APOEP02649 AC243312.1-201ENST00000570582 275 ntBASIC7.81□□□□□ -1.16
APOEP02649 AC006120.1-201ENST00000579375 546 ntBASIC7.81□□□□□ -1.16
APOEP02649 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.81□□□□□ -1.16
APOEP02649 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.81□□□□□ -1.16
APOEP02649 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.81□□□□□ -1.16
APOEP02649 CUX2P1-201ENST00000606426 298 ntBASIC7.81□□□□□ -1.16
APOEP02649 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 AC006335.3-201ENST00000613408 292 ntBASIC7.81□□□□□ -1.16
APOEP02649 FAM27E3-202ENST00000614611 340 ntBASIC7.81□□□□□ -1.16
APOEP02649 SAMMSON-214ENST00000641395 1264 ntBASIC7.81□□□□□ -1.16
APOEP02649 AC119674.1-209ENST00000642031 997 ntBASIC7.81□□□□□ -1.16
APOEP02649 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.81□□□□□ -1.16
APOEP02649 SALL4P7-201ENST00000555779 3120 ntBASIC7.81□□□□□ -1.16
APOEP02649 AL445250.1-203ENST00000641829 1535 ntBASIC7.81□□□□□ -1.16
APOEP02649 AP003119.3-201ENST00000566747 4192 ntBASIC7.81□□□□□ -1.16
APOEP02649 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 AL096816.1-201ENST00000623300 2920 ntBASIC7.81□□□□□ -1.16
APOEP02649 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 FOLH1B-202ENST00000529567 2145 ntBASIC7.81□□□□□ -1.16
APOEP02649 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
APOEP02649 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
APOEP02649 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.8□□□□□ -1.16
APOEP02649 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 MIR498-201ENST00000385134 124 ntBASIC7.8□□□□□ -1.16
APOEP02649 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
APOEP02649 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 AC113608.1-201ENST00000398740 305 ntBASIC7.8□□□□□ -1.16
APOEP02649 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.8□□□□□ -1.16
APOEP02649 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.8□□□□□ -1.16
APOEP02649 AC004692.1-201ENST00000455430 424 ntBASIC7.8□□□□□ -1.16
APOEP02649 RN7SL563P-201ENST00000481233 298 ntBASIC7.8□□□□□ -1.16
APOEP02649 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms