Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC073869.6-201ENST00000640656 341 ntBASIC9.54□□□□□ -0.88
ALDH1A1P00352 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 AC079248.1-201ENST00000427568 1546 ntBASIC9.54□□□□□ -0.88
ALDH1A1P00352 HIP1-207ENST00000616821 3120 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
ALDH1A1P00352 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
ALDH1A1P00352 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 AC005996.1-201ENST00000478788 1586 ntBASIC9.54□□□□□ -0.88
ALDH1A1P00352 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 PSMC1P4-201ENST00000515236 1327 ntBASIC9.54□□□□□ -0.88
ALDH1A1P00352 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
ALDH1A1P00352 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALDH1A1P00352 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
ALDH1A1P00352 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 C1orf116-202ENST00000461135 3142 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL356235.1-201ENST00000602791 2363 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 NCOA4P4-201ENST00000513338 1861 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 COL17A1-203ENST00000393211 1610 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 SP110-215ENST00000540870 2032 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 NPIPA5-201ENST00000360151 1088 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL590084.2-201ENST00000401481 382 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 SNORA81-201ENST00000408493 178 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 MEAF6P1-201ENST00000416092 327 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 SCP2-206ENST00000430330 938 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC098826.1-201ENST00000433943 471 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 MRPS33P4-201ENST00000434892 317 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL008629.1-201ENST00000438615 184 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 MORF4L1P4-201ENST00000450245 976 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 MTND2P14-201ENST00000482139 351 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC093281.2-201ENST00000510153 597 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 OR7E83P-201ENST00000511021 970 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 ASNSP4-201ENST00000511103 447 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC138356.2-201ENST00000521192 667 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 OR5G1P-201ENST00000525221 946 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL591767.2-201ENST00000554984 173 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 SETP1-201ENST00000556014 845 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 ANP32BP3-201ENST00000559213 706 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC022239.4-201ENST00000602626 504 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL590229.1-201ENST00000603497 542 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL353807.4-201ENST00000604995 257 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 AL078624.2-201ENST00000605063 554 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC091965.5-201ENST00000624785 342 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 CYP2B7P-203ENST00000599198 2956 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 ERVV-2-201ENST00000601417 2431 ntAPPRIS P1 TSL 4 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC9.53□□□□□ -0.88
ALDH1A1P00352 SUCLA2P2-201ENST00000417269 1309 ntBASIC9.53□□□□□ -0.88
ALDH1A1P00352 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALDH1A1P00352 CCDC36-201ENST00000296449 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
ALDH1A1P00352 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC9.52□□□□□ -0.88
ALDH1A1P00352 EDA-213ENST00000616899 4643 ntTSL 5 BASIC9.52□□□□□ -0.88
ALDH1A1P00352 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.88
ALDH1A1P00352 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC9.52□□□□□ -0.88
ALDH1A1P00352 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
ALDH1A1P00352 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC9.52□□□□□ -0.89
ALDH1A1P00352 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC9.52□□□□□ -0.89
ALDH1A1P00352 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms