Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 OR7E1P-201ENST00000533891 958 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC090607.2-201ENST00000560331 695 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 DNM1P33-201ENST00000565222 270 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 CD24P2-201ENST00000565486 219 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 MIR4642-201ENST00000583943 82 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC239600.2-201ENST00000619615 1165 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AL356118.1-201ENST00000635272 1078 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 RPL36AP21-202ENST00000639134 430 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC023818.2-201ENST00000623817 2304 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 RN7SKP208-201ENST00000365474 361 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 RNU1-11P-201ENST00000383975 164 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AL353692.2-201ENST00000407054 335 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 PTGES3P2-201ENST00000407942 482 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 RNU6-564P-201ENST00000410983 104 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AL358942.1-201ENST00000418595 1178 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 CLCN3P1-201ENST00000423965 1017 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC231532.1-201ENST00000438584 312 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 TPTE2P3-201ENST00000441562 1189 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC009963.4-201ENST00000448535 339 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 MED28P8-201ENST00000454831 521 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC109439.1-201ENST00000511236 715 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC244131.1-201ENST00000542152 922 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 MARK3P1-201ENST00000604796 643 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC087623.4-201ENST00000606593 695 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 MIR6829-201ENST00000620375 67 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AC007224.2-201ENST00000625011 510 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 MTCO1P4-201ENST00000520516 1409 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 AL513548.1-201ENST00000562904 1724 ntBASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms