Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SCARNA20.1-201ENST00000516009 138 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC100823.2-201ENST00000518337 699 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC6.97□□□□□ -1.29
SUMO3P55854 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC6.97□□□□□ -1.29
SUMO3P55854 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.97□□□□□ -1.29
SUMO3P55854 LINC00557-201ENST00000563184 1279 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC136944.5-201ENST00000573021 151 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC090415.1-201ENST00000581877 847 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 SNX29P2-204ENST00000603801 875 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AL008582.1-201ENST00000609612 442 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AL391903.2-201ENST00000614532 247 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 KDM5DP1-201ENST00000622542 298 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 AC073488.8-201ENST00000631952 757 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SUMO3P55854 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC6.97□□□□□ -1.29
SUMO3P55854 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.97□□□□□ -1.29
SUMO3P55854 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 PHF2P2-202ENST00000444553 2865 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.97□□□□□ -1.29
SUMO3P55854 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
SUMO3P55854 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.97□□□□□ -1.29
SUMO3P55854 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC6.97□□□□□ -1.29
SUMO3P55854 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.96□□□□□ -1.29
SUMO3P55854 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
SUMO3P55854 APP-209ENST00000440126 2846 ntTSL 2 BASIC6.96□□□□□ -1.29
SUMO3P55854 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SUMO3P55854 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SUMO3P55854 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.96□□□□□ -1.29
SUMO3P55854 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.29
SUMO3P55854 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SUMO3P55854 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.96□□□□□ -1.29
SUMO3P55854 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
SUMO3P55854 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 RPL5P8-201ENST00000396820 815 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.96□□□□□ -1.3
SUMO3P55854 RN7SKP89-201ENST00000410774 242 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 CRIP1P3-201ENST00000416794 220 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 RPL12P43-201ENST00000420608 499 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.96□□□□□ -1.3
SUMO3P55854 VN1R35P-201ENST00000428102 693 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC6.96□□□□□ -1.3
SUMO3P55854 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SUMO3P55854 AC245047.5-201ENST00000437312 556 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 AL390026.1-201ENST00000456647 457 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 TDGF1P6-201ENST00000463873 448 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.96□□□□□ -1.3
SUMO3P55854 RN7SL414P-201ENST00000469545 294 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 RN7SL332P-201ENST00000482163 254 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.96□□□□□ -1.3
SUMO3P55854 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.96□□□□□ -1.3
SUMO3P55854 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.96□□□□□ -1.3
SUMO3P55854 AC112206.4-201ENST00000515142 405 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 AP006437.1-202ENST00000530327 933 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.96□□□□□ -1.3
SUMO3P55854 AP000619.1-201ENST00000540293 1000 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.96□□□□□ -1.3
SUMO3P55854 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.96□□□□□ -1.3
SUMO3P55854 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC6.96□□□□□ -1.3
SUMO3P55854 AC122134.1-202ENST00000569111 1201 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 MTND2P13-201ENST00000577438 1039 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 FAM60CP-201ENST00000591086 664 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC6.96□□□□□ -1.3
SUMO3P55854 AC022239.4-201ENST00000602626 504 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC6.96□□□□□ -1.3
SUMO3P55854 AL451085.1-201ENST00000604546 690 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 OR7M1P-201ENST00000608946 533 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 AC026367.3-201ENST00000619032 590 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 AC124045.1-201ENST00000606008 1953 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms