Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.72□□□□□ -1.33
FREM3P0C091 SIGLEC31P-201ENST00000594237 551 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 AC099667.1-201ENST00000624222 469 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.72□□□□□ -1.33
FREM3P0C091 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.72□□□□□ -1.33
FREM3P0C091 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FREM3P0C091 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.72□□□□□ -1.33
FREM3P0C091 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
FREM3P0C091 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC6.72□□□□□ -1.33
FREM3P0C091 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
FREM3P0C091 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.72□□□□□ -1.33
FREM3P0C091 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
FREM3P0C091 RBM5-AS1-201ENST00000630404 1386 ntBASIC6.72□□□□□ -1.33
FREM3P0C091 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
FREM3P0C091 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
FREM3P0C091 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
FREM3P0C091 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.33
FREM3P0C091 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
FREM3P0C091 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.71□□□□□ -1.33
FREM3P0C091 RPS3AP5-201ENST00000389400 821 ntBASIC6.71□□□□□ -1.33
FREM3P0C091 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
FREM3P0C091 AL139806.1-201ENST00000403057 1002 ntBASIC6.71□□□□□ -1.33
FREM3P0C091 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
FREM3P0C091 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.71□□□□□ -1.33
FREM3P0C091 NDUFB4P1-201ENST00000462398 381 ntBASIC6.71□□□□□ -1.33
FREM3P0C091 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.71□□□□□ -1.33
FREM3P0C091 AC013283.1-201ENST00000557282 492 ntBASIC6.71□□□□□ -1.33
FREM3P0C091 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.71□□□□□ -1.33
FREM3P0C091 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
FREM3P0C091 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.71□□□□□ -1.33
FREM3P0C091 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
FREM3P0C091 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
FREM3P0C091 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
FREM3P0C091 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.71□□□□□ -1.33
FREM3P0C091 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.71□□□□□ -1.33
FREM3P0C091 AC009166.2-201ENST00000624410 2833 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.71□□□□□ -1.34
FREM3P0C091 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
FREM3P0C091 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
FREM3P0C091 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
FREM3P0C091 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
FREM3P0C091 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.71□□□□□ -1.34
FREM3P0C091 RN7SKP117-201ENST00000410175 264 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.71□□□□□ -1.34
FREM3P0C091 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.71□□□□□ -1.34
FREM3P0C091 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.71□□□□□ -1.34
FREM3P0C091 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 AC025271.1-201ENST00000485045 429 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.71□□□□□ -1.34
FREM3P0C091 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.71□□□□□ -1.34
FREM3P0C091 AC107952.1-201ENST00000524200 376 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 AP003084.1-201ENST00000524828 742 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.71□□□□□ -1.34
FREM3P0C091 EGLN3P1-201ENST00000541727 720 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 AL356800.1-201ENST00000553339 735 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 AC092368.2-201ENST00000565911 600 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.71□□□□□ -1.34
FREM3P0C091 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.71□□□□□ -1.34
FREM3P0C091 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.71□□□□□ -1.34
FREM3P0C091 AC130456.6-201ENST00000623745 765 ntBASIC6.71□□□□□ -1.34
FREM3P0C091 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.71□□□□□ -1.34
FREM3P0C091 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.71□□□□□ -1.34
FREM3P0C091 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
FREM3P0C091 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FREM3P0C091 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.71□□□□□ -1.34
FREM3P0C091 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FREM3P0C091 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC6.7□□□□□ -1.34
FREM3P0C091 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
FREM3P0C091 OR2A20P-201ENST00000479887 2913 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FREM3P0C091 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
FREM3P0C091 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FREM3P0C091 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FREM3P0C091 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FREM3P0C091 SNORA73B-201ENST00000363217 204 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.7□□□□□ -1.34
FREM3P0C091 AL645936.2-201ENST00000430565 928 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.7□□□□□ -1.34
FREM3P0C091 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.7□□□□□ -1.34
FREM3P0C091 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.7□□□□□ -1.34
FREM3P0C091 RHEBP1-201ENST00000448647 556 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 AL591379.2-201ENST00000450223 397 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 RN7SL153P-201ENST00000486501 292 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 AP001646.2-201ENST00000528645 1156 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.7□□□□□ -1.34
FREM3P0C091 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.7□□□□□ -1.34
FREM3P0C091 AL132640.2-202ENST00000559732 614 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 AC024085.1-201ENST00000604299 432 ntBASIC6.7□□□□□ -1.34
FREM3P0C091 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms