Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 NF1P8-201ENST00000415351 1461 ntBASIC8.12□□□□□ -1.11
UBE4BO95155 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE4BO95155 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE4BO95155 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
UBE4BO95155 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE4BO95155 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE4BO95155 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE4BO95155 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.12□□□□□ -1.11
UBE4BO95155 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE4BO95155 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.11□□□□□ -1.11
UBE4BO95155 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.11□□□□□ -1.11
UBE4BO95155 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
UBE4BO95155 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
UBE4BO95155 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
UBE4BO95155 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
UBE4BO95155 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 RPL5P5-201ENST00000392009 893 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 AC109638.1-201ENST00000417406 326 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 FDPSP1-201ENST00000424976 1071 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 RPL5P34-201ENST00000426545 891 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE4BO95155 RPL5P9-201ENST00000448118 886 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 RPL23P10-201ENST00000468780 412 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 RN7SL228P-201ENST00000470060 303 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE4BO95155 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.11□□□□□ -1.11
UBE4BO95155 EIF3KP1-201ENST00000513279 656 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 RPL10P18-201ENST00000519384 309 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE4BO95155 CRADD-210ENST00000552033 622 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE4BO95155 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 BOLA2P1-201ENST00000584794 232 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
UBE4BO95155 AC080112.3-201ENST00000612552 880 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.11□□□□□ -1.11
UBE4BO95155 OR5AU1-204ENST00000641822 1197 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
UBE4BO95155 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
UBE4BO95155 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
UBE4BO95155 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 AF131215.2-201ENST00000531549 1710 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 AC008937.3-201ENST00000606813 1700 ntBASIC8.11□□□□□ -1.11
UBE4BO95155 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE4BO95155 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE4BO95155 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE4BO95155 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
UBE4BO95155 RNA5SP238-201ENST00000365464 120 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.1□□□□□ -1.11
UBE4BO95155 AL354794.2-201ENST00000424795 1248 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.1□□□□□ -1.11
UBE4BO95155 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 RPL7P17-201ENST00000470927 724 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AC040975.1-201ENST00000472104 316 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE4BO95155 AC008040.4-201ENST00000494834 768 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE4BO95155 AC117383.2-201ENST00000514722 322 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC8.1□□□□□ -1.11
UBE4BO95155 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
UBE4BO95155 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE4BO95155 AC044860.3-201ENST00000559957 368 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 AL592504.1-201ENST00000605319 439 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AL109936.2-201ENST00000605350 650 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 SSXP3-201ENST00000442971 1300 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE4BO95155 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE4BO95155 UGT2B25P-201ENST00000511504 1586 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE4BO95155 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UBE4BO95155 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE4BO95155 SAMMSON-203ENST00000641005 2168 ntBASIC8.1□□□□□ -1.11
UBE4BO95155 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE4BO95155 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.1□□□□□ -1.11
UBE4BO95155 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms