Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 GOT2P1-201ENST00000440922 1309 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 PPIAP30-201ENST00000415473 519 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 GAPDHP51-201ENST00000426454 1000 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 VDAC2P3-201ENST00000430995 828 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ANKRD54P1-201ENST00000433115 471 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ATP5LP4-201ENST00000434169 307 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC105052.2-201ENST00000434317 794 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC245047.5-201ENST00000437312 556 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AL731892.1-201ENST00000437364 1192 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 RN7SL791P-201ENST00000467868 295 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC008620.1-201ENST00000468453 592 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC022296.2-201ENST00000512424 202 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 RN7SL14P-201ENST00000579715 298 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 uc_338.21-201ENST00000622458 147 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC008555.1-201ENST00000561778 2757 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 AC011008.2-201ENST00000624866 3352 ntBASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
C9orf40Q8IXQ3 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 PWRN1-212ENST00000569908 1435 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 WNK1-220ENST00000574564 1401 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 MAPK10-377ENST00000642006 2752 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 RNA5SP238-201ENST00000365464 120 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 SNORA68-201ENST00000384437 133 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 CLIC4P3-201ENST00000422221 752 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 CR391992.1-201ENST00000438601 394 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC092421.1-201ENST00000448148 418 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 RN7SL688P-201ENST00000471754 275 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC016559.1-201ENST00000511420 199 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 EGLN3P1-201ENST00000541727 720 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AL513548.2-201ENST00000602994 1207 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC018558.4-201ENST00000622153 281 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AL023806.3-201ENST00000638502 2704 ntBASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.85□□□□□ -1.31
C9orf40Q8IXQ3 AC006116.1-201ENST00000587908 2171 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms