Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC024937.2-201ENST00000411669 1242 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 ANXA2P2-201ENST00000435128 1020 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 RPL14P5-201ENST00000436474 730 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 RN7SL251P-201ENST00000464175 297 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 RN7SL456P-201ENST00000469290 295 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC084878.1-201ENST00000480555 648 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC025271.1-201ENST00000485045 429 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC008496.1-201ENST00000509131 295 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC126177.6-201ENST00000550420 1009 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC113361.1-201ENST00000606683 543 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC009283.1-201ENST00000615852 645 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 AC117503.3-201ENST00000623811 601 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 AL121835.2-201ENST00000624253 3502 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 RNU4-81P-201ENST00000363561 144 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 RPS3AP5-201ENST00000389400 821 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 AL139806.1-201ENST00000403057 1002 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 OR5M13P-201ENST00000433944 937 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 OSTCP2-201ENST00000437956 444 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 AL592114.2-201ENST00000440142 532 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 AL161626.1-201ENST00000441480 490 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 AC079781.1-201ENST00000441505 394 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 AC093799.1-201ENST00000452411 499 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 TREML3P-201ENST00000457327 501 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 CBX5P1-201ENST00000468470 561 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 AL023806.2-201ENST00000603042 263 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 AL121782.1-201ENST00000611242 413 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 AL590396.3-201ENST00000636334 300 ntBASIC8.75□□□□□ -1.01
HLA-DOAP06340 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-DOAP06340 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-DOAP06340 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 THAP12P3-201ENST00000456373 2266 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AF121897.1-201ENST00000411867 3980 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 U3.48-201ENST00000363172 216 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 MICG-208ENST00000416822 132 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 FDPSP1-201ENST00000424976 1071 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 FTH1P5-201ENST00000425761 545 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 RPL29P7-201ENST00000440227 457 ntBASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms